Query= MSMg01no371_g11.b1 MSMg01no371_g11.b1 CHROMAT_FILE:
MSMg01no371_g11.b1 PHD_FILE: MSMg01no371_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:49 2005
(401 letters)
>mm_chr7_146278247_146279047
Length = 801
Score = 760 bits (393), Expect = 0.0
Identities = 399/401 (99%)
Strand = Plus / Plus
Query: 1 tatgtggcatctgcagctcacagatgagtagggccaagacactggacttcctgactatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtggcatctgcagctcacagatgagtagggccaagacactggacttcctgactatag 260
Query: 61 aacccttgacacttataagacactgttgtctgcccgctatggacccaaggccatctcctt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aacccttgacacttataagacactgttgtctgcctgctatggacccaaggccatctcctt 320
Query: 121 gggttccggtttccagagaatgagagtcctcacactgatgtcctttggagcatagggccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggttccggtttccagagaatgagagtcctcacactgatgtcctttggagcatagggccc 380
Query: 181 gatgcctcctccacttgagtgtagtggagtccgctctccagcttgcagttggagcctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgcctcctccacttgagtgtagtggagtccgctctccagcttgcagttggagcctcat 440
Query: 241 atctctgatcagggtgtccgcagcgctgcctctccctgtcacaattgcctcctaatcaga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctctgagcagggtgtccgcagcgctgcctctccctgtcacaattgcctcctaatcaga 500
Query: 301 aattgacatcacatgcaagtcattacctgggagggtgtccccatttttcccggggtgccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgacatcacatgcaagtcattacctgggagggtgtccccatttttcccggggtgccc 560
Query: 361 caggttatttctagctagtaaggggatagggccctggactg 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggttatttctagctagtaaggggatagggccctggactg 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_g11.g1 MSMg01no371_g11.g1 CHROMAT_FILE:
MSMg01no371_g11.g1 PHD_FILE: MSMg01no371_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:49 2005
(533 letters)
>mm_chr7_146474779_146475711
Length = 933
Score = 969 bits (501), Expect = 0.0
Identities = 522/529 (98%), Gaps = 2/529 (0%)
Strand = Plus / Minus
Query: 6 gaattctttcttcttccc-gatgtcccgcctctatttcctacttaagccgtaggccatag 64
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaattctttcttc-tcccggatgtcccgcctctatttcctacttaagccgtaggccatag 565
Query: 65 gctttttaattgacaggtgatgcatccatacaacacacaagattttctctctacaacagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctttttaattgacaggtgatgcatccatacaacacacaagattttctctctacaacagt 505
Query: 125 gatccaagtatctaaaggaacgggttgatgaaggaaaaccttaatctggaacgtggttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 gatccaagtatctaaaggaacgggttgatgaaggaaaaccttaatctggaatgtggttta 445
Query: 185 tcagggttcattcagctccatgcacctgggcagaccgttgtggtggtagtggtttgtggc 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 tcagggttcattcagctccatgcacctgggcagaccgttgtggtggtagcggtttgtggc 385
Query: 245 caggaacaggttgttgacctcaaggtagacatgatatttagaataagaaaaattatagct 304
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 384 caggaacaggttgttgacctcaaggtagacatgaaataaagaataagaaaaattatagct 325
Query: 305 gactggaggccagctataatttcaaaggcacagctccccaccccccacaacttgtttccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactggaggccagctataatttcaaaggcacagctccccaccccccacaacttgtttccc 265
Query: 365 ccagctaggtctacctactaaagtttgtagaccctcccaaacagcaccatcagctgggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccagctaggtctacctactaaagtttgtagaccctcccaaacagcaccatcagctgggaa 205
Query: 425 tcaagtgttccatatgttcagcacacaagccagacagtgtccttctggcacctcttgtct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcaagtgttccatatgttcagcacacaagccagacagtgtccttctggcacctcttgtct 145
Query: 485 agaatagagtggtggtcaggcagagcaagtccccattcctactcccacc 533
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 agaatagagtggtggtcaggcagagcaagtccccattcctactcccacc 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
