Query= MSMg01no373_a05.b1 MSMg01no373_a05.b1 CHROMAT_FILE:
MSMg01no373_a05.b1 PHD_FILE: MSMg01no373_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:53 2005
(565 letters)
>mm_chr7_123645510_123646474
Length = 965
Score = 1044 bits (540), Expect = 0.0
Identities = 555/560 (99%), Gaps = 2/560 (0%)
Strand = Plus / Minus
Query: 7 ggaattccaggccagtcc-gagctctgtaagaacctgccttatgaaacaaaaacaagata 65
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggaattccaggccag-cctgagctctgtaagaacctgccttatgaaacaaaaacaagata 603
Query: 66 ctagactattaacttatttaagccaggaactgccttgaacatttccattacctattaacc 125
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctagactattaacttattaaagccaggaactgccttgaacatttccattacctattaacc 543
Query: 126 tatcacaaggacaaataccatgtgaatggggcacaaaaactgggcatagattttctaagg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tatcacaaggacaaataccatgtgaatggggcacaaaaactgggcatagattttctaagg 483
Query: 186 gcaaaccttagaaaccctggtgctgatctgtctgtatgattcatagaaatctgctgcaga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 482 gcaaaccttagaaaccctggtgctgatctgtctgtatgattcatagaaatctgatgcaga 423
Query: 246 tcagtaaaacctggcaaacgagaaggtggaatccatccaatgatgtaattaaaggaagaa 305
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 422 tcagtaaaacctggcaaacgagaaggtggaattcatccaatgatgtaattaaaggaagaa 363
Query: 306 gacagcgaacaggagtatggtgactgaggtgacgacacctttctggggtgaagggcatgg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gacagcgaacaggagtatggtgactgaggtgacgacacctttctggggtgaagggcatgg 303
Query: 366 ggaagacaagaaaaacaggctgaacaataagtaaacagcaatttcctggattagaagaca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggaagacaagaaaaacaggctgaacaataagtaaacagcaatttcctggattagaagaca 243
Query: 426 gcggagcacagcacttcagaaggccatgaggataaaagcctggagtagtggctcttaatc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcggagcacagcacttcagaaggccatgaggataaaagcctggagtagtggctcttaatc 183
Query: 486 caagcacttgggagactgaagcagaagaatcaactttaagtttgaggtcagtccagggaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caagcacttgggagactgaagcagaagaatcaactttaagtttgaggtcagtccagggaa 123
Query: 546 cagtgtgagattctgactcc 565
||||||||||||||||||||
Sbjct: 122 cagtgtgagattctgactcc 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_a05.g1 MSMg01no373_a05.g1 CHROMAT_FILE:
MSMg01no373_a05.g1 PHD_FILE: MSMg01no373_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:53 2005
(512 letters)
>mm_chr7_123507089_123507997
Length = 909
Score = 922 bits (477), Expect = 0.0
Identities = 502/513 (97%), Gaps = 7/513 (1%)
Strand = Plus / Plus
Query: 1 cctctgtagactaggatagcctcaaactcagaaatctgcctgcttctaaaggtgtgtgcc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctctgtagactaggttagcctcaaactcagaaatctgcctgcttctaaaggtgtgtgcc 260
Query: 61 accaccacccagttcacaaatctccacttaaactcttccattcttactattccctcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaccacccagttcacaaatctccacttaaactcttccattcttactattccctcttct 320
Query: 121 gctt-gtctatcacatgtgttctcctgccctgccctcctacccttccctcaatacctttc 179
|||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 321 gctttgtctatcacatgtgttctcctgccct-----cctacccttcccttaatacctttc 375
Query: 180 tttttactcaagtagaaaaaaa-gcactaaatgcagattctattcccaggttattgcaaa 238
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttttactcaagtagaaaaaaaagcactaaatgcagattctattcccaggttattgcaaa 435
Query: 239 ctttagcttcataaaaactaattttgtctccatcataaaatattaattattaataattat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctttagcttcataaaaactaattttgtctccatcataaaatattaattattaataattat 495
Query: 299 aaatttagatctttatgagttcgaggccagcctgtctacaaagtgaattctgaaacagtc 358
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 496 aaatttagatctttatgagttcgaggccagcctgtttacaaagtgaattctgaaacagtc 555
Query: 359 acagctacacagagaaaccctgtcttgaaaagaaacttttttgtaaattatatgataatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 acagctacacagagaaaccctgtcttgaaaagaaacttttttgtaaattatatgataatt 615
Query: 419 aataaaaaattattattcaaaactagccatttaattctttctttaggttaagttttattt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aataaaaaattattattcaaaactagccatttaattctttctttaggttaagttttattt 675
Query: 479 gacacaaaatgcttttttgactattttaatgaa 511
||||||||||||||||||||| |||||||||||
Sbjct: 676 gacacaaaatgcttttttgaccattttaatgaa 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 909
Length adjustment: 10
Effective length of query: 502
Effective length of database: 899
Effective search space: 451298
Effective search space used: 451298
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
