Query= MSMg01no373_h23.b1 MSMg01no373_h23.b1 CHROMAT_FILE:
MSMg01no373_h23.b1 PHD_FILE: MSMg01no373_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:28 2005
(514 letters)
>mm_chr7_120816651_120817564
Length = 914
Score = 895 bits (463), Expect = 0.0
Identities = 496/507 (97%), Gaps = 2/507 (0%)
Strand = Plus / Minus
Query: 9 gaattctttaagagtccgctgaggtaggagaattccgaaacgtcaggagggcttcgaggg 68
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaattctttaagaggcagctgaggtaggagaattccgaaacgtcaggagggcttcgaggg 655
Query: 69 ggtgcctggcatgagtcactgctggcagcttcccactcacgactcaaactattgcaccta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggtgcctggcatgagtcactgctggcagcttcccactcacgactcaaactattgcaccta 595
Query: 129 gagggaacggtggcaggctgtgagccgagggaaggagtctttcggggtacggggacaaga 188
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 594 gagggaacggtggcaggctgtgagccgagggaaggagtctttaggggtacggggacaaga 535
Query: 189 ggaactctccgttctcagttctgatcgcaagggatgcttcttggccattctttcccttct 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 534 ggaactctccgttctcagttctgatcgcaagggatgcttcttggccattctttccctgct 475
Query: 249 tcc-ttagatctgttagtgcggggtatcgtgagggaagccacaaagatttgggacagggc 307
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccatt-gatctgttagtgcggggtatcgtgagggaagccacaaagatttgggacagggc 416
Query: 308 tcagacctggttcatttttacatgtgtcagtgtgtgcgcagtcccaaggttctccgagcc 367
||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 415 tcagacctggtccattttcacatgtgtcagtgtgtgagcagtcccaaggttctccgagcc 356
Query: 368 ttctttatctctgctgtaaaaagcctccttggaatcttgggaagatggaggctggccttt 427
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 355 ttctttatctctgctgtaaaaagcctgcttggaatcttgggaagatggaggctggccttt 296
Query: 428 agcaagctcatcttccacgcagactcccttcctctgttttggtttcccacgtacttagcc 487
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agcaaactcatcttccacgcagactcccttcctctgttttggtttcccacgtacttagcc 236
Query: 488 ttttaagggaaaagcaacaatacctct 514
|||||||||||||||||||||||||||
Sbjct: 235 ttttaagggaaaagcaacaatacctct 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_h23.g1 MSMg01no373_h23.g1 CHROMAT_FILE:
MSMg01no373_h23.g1 PHD_FILE: MSMg01no373_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:28 2005
(346 letters)
>mm_chr7_120652599_120653344
Length = 746
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 cattgctttcatcagaactaggtatggacttttgaaattatgtaccaatattccttaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgctttcatcagaactaggtatggacttttgaaattatgtaccaatattccttaaag 260
Query: 61 atatttttgtcttaaatttattagtgatcgatgtattttctggaaacagtgcctggtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatttttgtcttaaatttattagtgatcgatgtattttctggaaacagtgcctggtgta 320
Query: 121 cacatatactacgctgccaagcctgaggagtgattaacttagttccatgtcttttgagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatatactacgctgccaagcctgaggagtgattaacttagttccatgtcttttgagaa 380
Query: 181 gatactaaatgaatgaacatgaatattatcatctttatcttattctggtgtcctttcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatactaaatgaatgaacatgaatattatcatctttatcttattctggtgtcctttcaga 440
Query: 241 gtttattattcagttagacaggccctctctgcctctctctgcctctgtctctctgtctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttattattcagttagacaggccctctctgcctctctctgcctctgtctctctgtctct 500
Query: 301 ctctatgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctatgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
