Query= MSMg01no373_k06.b1 MSMg01no373_k06.b1 CHROMAT_FILE:
MSMg01no373_k06.b1 PHD_FILE: MSMg01no373_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:38 2005
(596 letters)
>mm_chr7_53371177_53372172
Length = 996
Score = 1091 bits (564), Expect = 0.0
Identities = 585/592 (98%)
Strand = Plus / Plus
Query: 5 gaattcctgcagctactccaaagggtgttggcctccgtttagccttcctgactctcaggc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgcagctactcaaaagggtgttggcctccgtttagccttcctgactctcaggc 264
Query: 65 tcaccgtgaccactgagaacctccttggcttgacttcccttgggacacagagccctctcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaccgtgaccactgagaacctccttggcttgacttcccttgggacacagagccctctcc 324
Query: 125 caggagagccgttccctggggacagtctgtcaactggatgacagtgagaagctatgtcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caggagagccgttccctggggacagtctgtcaactggatgacagtgagaagctatgtcag 384
Query: 185 ctgtcagcactctggctgcgacctggagttggcccaaccctgccagagaacttctgaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgtcagcactctggctgcgacctggagttggcccaaccctgccagagaacttctgaact 444
Query: 245 tctgactaggggcaaacagagggtaagttaacgaggcttcatgtcccccagccacagagt 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 tctgactaggggcaaacagagggtaagttaacgaggcgccatgtcccccagccacagagt 504
Query: 305 cagcaaagctggagagtcaaagagtagccaagcagagcgctagctatgaggtagagttac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagcaaagctggagagtcaaagagtagccaagcagagcgctagctatgaggtagagttac 564
Query: 365 agaggtctggaagccacgaggccggggaaccagcatgctcatgtggttgcatatcagttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaggtctggaagccacgaggccggggaaccagcatgctcatgtggttgcatatcagttt 624
Query: 425 gaccagccagtcgggcatgatgttaaagcatctcgacacctgacactttcagggctctgt 484
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 625 gaccagccagtcgggcatgatgttaaagcgtctcgacacctgacactttcagggctctgt 684
Query: 485 tccatctcattagggtgattcgaacagttaatcctactccccccaccccccagtgtcaga 544
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccatctcattagggtgattcaaacagttaatcctactccccccaccccccagtgtcaga 744
Query: 545 aaatgcagtctgcggagggagttagggagaggaggcagtggaacttgtgggc 596
||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 745 aaatgcagtctgcagagggagttggggagaggaggcagtggaacttgtgggc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_k06.g1 MSMg01no373_k06.g1 CHROMAT_FILE:
MSMg01no373_k06.g1 PHD_FILE: MSMg01no373_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:39 2005
(507 letters)
>mm_chr7_53437262_53438158
Length = 897
Score = 810 bits (419), Expect = 0.0
Identities = 479/503 (95%), Gaps = 10/503 (1%)
Strand = Plus / Minus
Query: 5 agtggggtaccttcacttaaagcactctcccagtgcttacagcaagaaatgtggcagggt 64
||||||||||||| ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 697 agtggggtacctttgcttaaagcactctcccagtgcttacag------acgtggcagggt 644
Query: 65 ctccagggctagcaaacccagaggcccgcccctcactgtatggagacacacgcaagtcca 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ctccggggctagcaaacccagaggcccgcccctcactgtatggagacacacgcaagtcca 584
Query: 125 tttcatccataaaggatgccacgaagcatgcactcctccaggcctgtgtccgtgttctct 184
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 583 tttcatccataaaggatgccatgaagcatgcgctcctccaggcctgtgtccgtgttctct 524
Query: 185 gcacccaccccactgaagccccaggaaggaccacaccatgcaggttgcttgtgttttcaa 244
|||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 523 gcacccaccccactgaag-cccaggaaggactacaccatgcaggttgct--tgttttcag 467
Query: 245 tgaccctgcactgatgggcatttgaggtgattctagggtccagctacaaagcaggcctat 304
||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 466 tgaccctgcactgatgggcatttgaggtgcttctagggcccagctacaaagcagttctat 407
Query: 305 cacacatccttggcagctacagagagccttcttgggcagctggcaccattcgttccaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 cacacatccttggcagctacagagagccttcttgggcagctggcaccatgcgttccaaga 347
Query: 365 gaactctcaaatccttgtgtcaggcagtgggctgtgtggtctgtgtagactgctggcagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaactctcaaatccttgtgtcaggcagtgggctgtgtggtctgtgtagactgctggcagc 287
Query: 425 cacagtgtcccctgaggtaaacgggtcctcaagactgcaggctaaacatgctccagccac 484
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 286 cacagtgt-ccctgaggtaaacgggtcctcaagactgcaggctaaacatgctcccgccac 228
Query: 485 ttgcagctctcctcactagaatg 507
|||||||||||||||||||||||
Sbjct: 227 ttgcagctctcctcactagaatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 897
Length adjustment: 10
Effective length of query: 497
Effective length of database: 887
Effective search space: 440839
Effective search space used: 440839
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
