Query= MSMg01no375_h10.b1 MSMg01no375_h10.b1 CHROMAT_FILE:
MSMg01no375_h10.b1 PHD_FILE: MSMg01no375_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:04 2005
(492 letters)
>mm_chr7_131640510_131641403
Length = 894
Score = 841 bits (435), Expect = 0.0
Identities = 478/499 (95%), Gaps = 13/499 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagtattcttggtcatccaggacctatatcataatctctagatagcagttcttc 63
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggaattcagtagccatggtcatccaggacctatatcataatctctagatagcagttcttc 258
Query: 64 accaaataattagaaaaaa--------gggggaaaaaagtatgtgtcgggctgaagtaga 115
||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct: 259 accaaataattagaaaacaggggggggggggg---aaagtatgtgtcgggctgaagtaga 315
Query: 116 agacttgtgtgtttacctgaggaagttagaaagctgcaaatgaactgctaggttga--at 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 316 agacttgtgtgtttacctgaggaagttagaaagctgcaaatgaactgctaggttgagtat 375
Query: 174 atagacaaggaaaccagtacggctaagatcctagtggctaagcacaaagcagccacaaca 233
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agagacaaggaaaccagtacggctaagatcctagtggctaagcacaaagcagccacaaca 435
Query: 234 tcattacgaatgcccactggatggattcaaacatgaaagtgttctcatgtccatgatgag 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcattacgaatgcccactggatggattcaaacatgaaagtgttctcatgtccatgatgag 495
Query: 294 tctaagaagaaaattggctttattattgaaaaatgccagaaaaacaaattgttgtttcga 353
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctaagaagaaaattgactttattattgaaaaatgccagaaaaacaaattgttgtttcga 555
Query: 354 aaacttgtaaataaaaggaagaatgtaatgcttcactgtcgagtaggctgaattgataaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaacttgtaaataaaaggaagaatgtaatgcttcactgtcgagtaggctgaattgataaa 615
Query: 414 tatctgggaaaatttcatgagccccatctttaagtgcctctgtgagggcatttccaatac 473
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 616 tatctgggaaattttcatgagccccatctttaagtgcatctgtgagggcatttccaatac 675
Query: 474 aattatctgatcaagaaaa 492
|||||||||||||||||||
Sbjct: 676 aattatctgatcaagaaaa 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 894
Length adjustment: 10
Effective length of query: 482
Effective length of database: 884
Effective search space: 426088
Effective search space used: 426088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_h10.g1 MSMg01no375_h10.g1 CHROMAT_FILE:
MSMg01no375_h10.g1 PHD_FILE: MSMg01no375_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:04 2005
(229 letters)
>mm_chr7_131789399_131790027
Length = 629
Score = 435 bits (225), Expect = e-127
Identities = 228/229 (99%)
Strand = Plus / Minus
Query: 1 attagcatctttatagaaaaatgatctatcagaagagttggaagagtgggggagagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 attagcatctttatagaaaaatgatctatcagaagagttggaagagtgggggagagagag 370
Query: 61 gctggcagagggtgaggggaagacagagggtcagaggttctgtgggaagaggaaaggctg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gctggcggagggtgaggggaagacagagggtcagaggttctgtgggaagaggaaaggctg 310
Query: 121 ctgctgcatcattatttactaactcttgaattttgaatcctgtacactaagtaattttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctgctgcatcattatttactaactcttgaattttgaatcctgtacactaagtaattttta 250
Query: 181 aacacattgcctttggttttctctatctgtatgttgtatgtgtcgtggg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aacacattgcctttggttttctctatctgtatgttgtatgtgtcgtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
