Query= MSMg01no376_a18.b1 MSMg01no376_a18.b1 CHROMAT_FILE:
MSMg01no376_a18.b1 PHD_FILE: MSMg01no376_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:50 2005
(516 letters)
>mm_chr7_126808442_126809357
Length = 916
Score = 588 bits (304), Expect = e-172
Identities = 349/368 (94%), Gaps = 8/368 (2%)
Strand = Plus / Minus
Query: 1 tcaccacatgaagcatcatggtaactttacgtgattacctgtagcttagtgtgaaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaccacatgaagcatcatggtaactttacgtgattacctgtagcttagtgtgaaaacac 302
Query: 61 tcaggcttacatcattgacccatccaggcttgattcaacaacattgtcctacttttccat 120
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 tcaggcttacatcattgacccatccaggcttgattcaatgacattgtcctacttttccat 242
Query: 121 tgctgtgataaaataaatatccccataagaatgacttcattgtccattgtggcggttgac 180
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 241 tgctgtgataaaataaatatccccataagaacgacttcattgtccattgtggtggttgac 182
Query: 181 atagcttaagaaaggcatggtgtaatgtaaggaccacaaggccagctcattttagtgcat 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagcgaaagaaaggcatggtgtaatgtaaggaccacaaggccagctcattttagtgcat 122
Query: 241 ctgcactcatgagataggaattgaacaagaagcaaggctgggatataaagtctcaagaaa 300
||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||
Sbjct: 121 ctgcactcaggagataaaaaatgaacaagaagcaaggctgggatataaagtctc----aa 66
Query: 301 gatccactcccagtgacccacttcccccagtcaggttctttctacttcctaaaagttcca 360
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 65 gatccactcccagtgacccacttcccccattcagg----ttctacttcctaaaagttcca 10
Query: 361 cagcatca 368
||||||||
Sbjct: 9 cagcatca 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_a18.g1 MSMg01no376_a18.g1 CHROMAT_FILE:
MSMg01no376_a18.g1 PHD_FILE: MSMg01no376_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:50 2005
(145 letters)
>mm_chr7_126622628_126623174
Length = 547
Score = 269 bits (139), Expect = 6e-77
Identities = 145/147 (98%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 accttttcc-agccatgagtctgttgttgttagtttttcccctgggagttagacacaaaa 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttttccaagccatgagtctgttgttgttagtttttcccctgggagttagacacaaaa 260
Query: 60 tgattgacattggggtcacacctgtgcctggaaata-aaggtctctgttttcaccttttg 118
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tgattgacattggggtcacacctgtgcctggaaatacaaggtctctgttttcaccttttg 320
Query: 119 gcagcaagacattcctcagttagacat 145
|||||||||||||||||||||||||||
Sbjct: 321 gcagcaagacattcctcagttagacat 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 547
Length adjustment: 8
Effective length of query: 137
Effective length of database: 539
Effective search space: 73843
Effective search space used: 73843
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
