Query= MSMg01no376_b19.b1 MSMg01no376_b19.b1 CHROMAT_FILE:
MSMg01no376_b19.b1 PHD_FILE: MSMg01no376_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:55 2005
(483 letters)
>mm_chr7_139597435_139598317
Length = 883
Score = 890 bits (460), Expect = 0.0
Identities = 475/480 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaccctttataccaggctgaccttgaactcaagagatctgcctgcctccgcctt 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ggaattcaccctttagaccaggctgaccttgaactcaagagatctgcctgcctccgcctc 725
Query: 64 cagagtgctggggttgaagatgtgtgtcaccaaggcccagcaggaaatcatattttcata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cagagtgctggggttgaagatgtgtgtcaccaaggcccagcaggaaatcatattttcata 665
Query: 124 aactgacttattatgcagccccagcaccacccatttcaacaagaccaaatggcttcagaa 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aactgacttattatgaagccccagcaccacccatttcaacaagaccaaatggcttcagaa 605
Query: 184 ctggggaaagcagttgcttcattcagaacaattttcttatttgaagggaaaaaaattcat 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctggggaaaggagttgcttcattcagaacaattttcttatttgaagggaaaaaaattcat 545
Query: 244 cacccaaagtggcccaaggcagtacctttgtatttcaagggctcctcggcctctccgcca 303
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 544 cacccaaagtggcccaaggcagtacctttgtatttcaagggctccccggcctctccgcca 485
Query: 304 cacctgtgtgaggccggcctacagcagccaccatcactgacctgcagcatgcttggtccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cacctgtgtgaggccggcctacagcagccaccatcactgacctgcagcatgcttggtccc 425
Query: 364 tgaccgtactcctagtagagccgcctcaggagccgggtcctcattgctattctccacagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgaccgtactcctagtagagccgcctcaggagccgggtcctcattgctattctccacagc 365
Query: 424 aggcttgcacacgttacagctgcctcctcagcccacacaagacttccagagaaatgaaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aggcttgcacacgttacagctgcctcctcagcccacacaagacttccagagaaatgaaca 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_b19.g1 MSMg01no376_b19.g1 CHROMAT_FILE:
MSMg01no376_b19.g1 PHD_FILE: MSMg01no376_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:55 2005
(477 letters)
>mm_chr7_139427138_139428016
Length = 879
Score = 891 bits (461), Expect = 0.0
Identities = 474/479 (98%), Gaps = 2/479 (0%)
Strand = Plus / Plus
Query: 1 cccagggaatgagtatggccctgtgtctgctctgggactgtcaggaaggcaggggaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccagggaatgagtatggccctgtgtctgctctgggactgtcaggaaggcaggggaagtg 260
Query: 61 ctgaccttcccgccccgggactcacgc--gcgcacagaacagcatggaaacaactggcca 118
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ctgaccttcccgccccgggactcacgcacgcgcacagaacagcatggaaacaactggcca 320
Query: 119 gcaagcttgtgaaggaggactcactcttggcaggcaccagttgtgtgggtccatctttaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagcttgtgaaggaggactcactcttggcaggcaccagttgtgtgggtccatctttaa 380
Query: 179 ttattttaaatatgagtaaaagtacagaataaatgtcactcgcatatcataccttacaca 238
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ttattttaaatatgagtaaaagtacagaataaatgtgactcgcatatcataccttacacg 440
Query: 239 acaagggagggaaggtgtcatacaccctggcacacggctttgggaatacgaagtgtcttc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaagggagggaaggtgtcatacaccctggcacacggctttgggaatacgaagtgtcttc 500
Query: 299 ggtaccaggtctgtgtttcgctttggtttggggtgacaggctcgagagccatcacccaaa 358
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ggtaccaggtctgtgtttcgctttggtttggggtgacaggctcaagagccatcacccaaa 560
Query: 359 acactgcctgtgctctcaacaagagggggctccaaccgagcaaaagcaaaggcagtgccg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactgcctgtgctctcaacaagagggggctccaaccgagcaaaagcaaaggcagtgccg 620
Query: 419 gtgacccccggggagggagcaatagagagaagactgggtccggatggccacgcatggcg 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgacccccggggagggagcaatagagagaagactgggtccggatggccacgcatggcg 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 879
Length adjustment: 10
Effective length of query: 467
Effective length of database: 869
Effective search space: 405823
Effective search space used: 405823
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
