Query= MSMg01no376_e22.b1 MSMg01no376_e22.b1 CHROMAT_FILE:
MSMg01no376_e22.b1 PHD_FILE: MSMg01no376_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:10 2005
(384 letters)
>mm_chr7_17577092_17577875
Length = 784
Score = 659 bits (341), Expect = 0.0
Identities = 372/383 (97%), Gaps = 3/383 (0%)
Strand = Plus / Plus
Query: 5 gaattccatgttgtgaagaggaggaaagttcacctaagcagagccagcaaaagtgtcctc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 202 gaattccatgtcgtgaagaggaggaaagttcacctaagcagagccagcaaaagcgtcctc 261
Query: 65 cctcctacccataatggggacgctgcagccaggacaggacccaaacaaagcaccccaccc 124
|||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 262 cctcctacccccaatggggacgttgaagccaggacaggacccaaacaaagcaccccaccc 321
Query: 125 cgactccaaacctgaacctgaaaaatcctctcctgcaccttctttttctccgtccccttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cgactccaaacctgaacctgaaaaatcctctcctgcaccttctttttctccgtccccttt 381
Query: 185 cccttttcctcattgctcatgatctgcctccaaggtttttctgggttaaataaaatcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cccttttcctcattgctcatgatctgcctccaaggtttttctgggttaaataaaatcaca 441
Query: 245 aatgtttattttactttaattttttttttt-atgattgtgtgtgtgc--tcgcgcacgcg 301
||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 442 aatgtttatcttactttaattttttttttttatgattgtgtgtgtgcgctcacgcacgcg 501
Query: 302 cgctctcgcttgcgtaacctttgcaggcatgcttcttgtgaaggttagaaggtatcagat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cgctctcgcttgcgtaacctttgcaggcatgcttcttgtgaaggttagaaggtatcagat 561
Query: 362 ccccatcaactggagttctgggt 384
|||||||||||||||||||||||
Sbjct: 562 ccccatcaactggagttctgggt 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e22.g1 MSMg01no376_e22.g1 CHROMAT_FILE:
MSMg01no376_e22.g1 PHD_FILE: MSMg01no376_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:10 2005
(428 letters)
>mm_chr7_17714790_17715617
Length = 828
Score = 820 bits (424), Expect = 0.0
Identities = 427/428 (99%)
Strand = Plus / Minus
Query: 1 ttgaactaaactgaacaacaatttgaagtgaggtttcttatccctgacaccgtatttttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 525 ttgaactaaactgaacaacaatttgaagtgaggtttcttatccctgacactgtatttttg 466
Query: 61 ttagtccgtggctcttagggggagtattgtcatgtagtacagcctcatttaaatatacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttagtccgtggctcttagggggagtattgtcatgtagtacagcctcatttaaatatacat 406
Query: 121 gcttagataaatacaaactaatatgatcttctagtagatttttcagacctctttactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcttagataaatacaaactaatatgatcttctagtagatttttcagacctctttactgtt 346
Query: 181 atttatacctccacttccttctccttcattattgcccttactccttctccacaataaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atttatacctccacttccttctccttcattattgcccttactccttctccacaataaaga 286
Query: 241 cctccctgttttgttcccatttcctctccatagcacctggacccagtattctatttccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cctccctgttttgttcccatttcctctccatagcacctggacccagtattctatttccca 226
Query: 301 gtgctcctcctgcctcagggtcttttaattgaggaaggagggcccaggccactgtgggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gtgctcctcctgcctcagggtcttttaattgaggaaggagggcccaggccactgtgggca 166
Query: 361 gcaccatccctaggcagatggtccttggtcatacaggttgtataagaaaattagctaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gcaccatccctaggcagatggtccttggtcatacaggttgtataagaaaattagctaagc 106
Query: 421 ataagcca 428
||||||||
Sbjct: 105 ataagcca 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
