NNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCAGAGTGTATTGCCAGTAGGACTGGATTTGTAGGAAGTTTC
TCATCCAATGTGTTGGGAAGGAATCCAGGGCCATCTGCCTGGATGAGGCT
GGGAAGCTCAGTGAACACAATGAAAGGGAATACACAGACTCTTCTGTAAA
AACGATTTGCTAGTTCTGACATGTATACGATATATATAAGCCATATCTAC
CCCCATCCCCTTATAACTCCTCCTAAATACACACACACACACACACACAC
ACACACACACATACACACACACACACACACACACACACATCTCCTTCCCA
GCATTCAGCTTCATTGCCCTCCCTTTTAAATAGTCCATTAAGTTTAACTT
ACACATGTGTGTAGAGAGAGAACTATCCTTGGGAGCACAGAACACCTGCA
AGGACCACATCCCTAAGAAACAAACAAACAAACAAACAAACAAACAAAAA
GCCTGACTCTTTTTTCACCAACTGTCAGTGACCTCTCAGCAAATGGTGGA
GGCCCATGAGCCCCTCCCTCTAAACTGGCTGGACCTTGGNAAGGGCCTGC
ACAGGAAGATATGGGTGCTATAAATTCATGACCCCCTGGGCCTTTAAAAC
TCCCCCTCTTAAAACATTCCCCCCCAAAGATCCCCCAAACCCGGGGGGAA
GGGGGGTGGTATTTTAAAAATCACCCCTCCCCCGCGAAAAATCCTAAAAN

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGCCACTGAGCTATGTCTTTAGAG
AAGAGTATGGTTTTCAAGGCTTTAGTGAGCAGACAGTGGTCCTTGAATTG
GGGAAACCAAACTAAAGGAATCTTGTAATTATTCCAGCCAAGGGTCTGCA
GCGATTCCAGGGACACTGCAAAGCGAGGCGATCACAGTAGTTCTGTGTGT
TTGAAGAGATGTCAGAAAGGGTGAGTAACTAAAGCTTATACAGTAGGATG
ATAAAAAGGAGATGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGANANANANANANANANANANAGAGNAANAN
AAANANAGNAAAAAAAANANNAANANNNANANNNANAANAAAAANNAANN
AAAAAAAAAANANNNAANANNAAAAANAAAAAANANNNNNANAAAAANNA
AANNNAANANAAAAAAANAAAAANAAAAAAAAAAGGAAGNAAAANNAAAN
AAAAAAAAAAAGAGGAGAAANNNAGGAGAGGAGGAAAGAAGAAGANAGGG
AAAAAGAAAAAGAAAGAAANAGAAAAGAGAANGAGAAAAAGAGAGAAGAA
GAAAAAAGAAGAAGAGAAAGAGAAAAGAAAGAGGAGGNGGAAAAAGAAAG
AGAAAGAGAAGAAAAAAAGAAAGAGAANNAAAGAGAAAAGAAAAAGNAAG
AGAAGAANNNGNNA

Query= MSMg01no376_p24.b1 MSMg01no376_p24.b1 CHROMAT_FILE:
MSMg01no376_p24.b1 PHD_FILE: MSMg01no376_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:02 2005
         (421 letters)



>mm_chr7_75857109_75857929
          Length = 821

 Score =  768 bits (397), Expect = 0.0
 Identities = 405/411 (98%), Gaps = 6/411 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtaggactggatttgtaggaagtttctcatccaatgtgttgggaaggaatccagggcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agtaggactggatttgtaggaagtttctcatccaatgtgttgggaaggaatccagggcca 346

                                                                       
Query: 61  tctgcctggatgaggctgggaagctcagtgaacacaatgaaagggaatacacagactctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctgcctggatgaggctgggaagctcagtgaacacaatgaaagggaatacacagactctt 286

                                                                       
Query: 121 ctgtaaaaacgatttgctagttctgacatgtatacgatatatataagccatatctacccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctgtaaaaacgatttgctagttctgacatgtatacgatatatataagccatatctacccc 226

                                                                       
Query: 181 catccccttataactcctcctaaatacacacacacacacacacacacacacacacacata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 225 catccccttataactcctcctaaatacacacacacacacacacacacacacacacaca-- 168

                                                                       
Query: 241 cacacacacacacacacacacacacatctccttcccagcattcagcttcattgccctccc 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ----cacacacacacacacacacacatctccttcccagcattcagcttcattgccctccc 112

                                                                       
Query: 301 ttttaaatagtccattaagtttaacttacacatgtgtgtagagagagaactatccttggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ttttaaatagtccattaagtttaacttacacatgtgtgtagagagagaactatccttggg 52

                                                              
Query: 361 agcacagaacacctgcaaggaccacatccctaagaaacaaacaaacaaaca 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  agcacagaacacctgcaaggaccacatccctaagaaacaaacaaacaaaca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space:   334544
Effective search space used:   334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)