MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-377J11
Chromosome	7 (Build37)
Map Location	106,573,064 - 106,573,444
singlet/doublet	singlet
Overlap gene	Gdpd5
Upstream gene	Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1
Downstream gene	2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gucy2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14918 MGI:106030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC100040721 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 2 Proteins pseudo : _no_value

name	EG434215 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434215 MGI:3647721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins

name	A630091E08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233544 MGI:2442837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	2210018M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233545 MGI:1924203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Prkrir (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72981 MGI:1920231
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22411 MGI:101948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666978 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666978
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Uvrag (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78610 MGI:1925860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666529 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666529 MGI:3647698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Dgat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67800 MGI:1915050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mogat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233549 MGI:2663253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17760 MGI:1201690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Serpinh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12406 MGI:88283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdpd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233552 MGI:2686926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810406K13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72184 MGI:1919434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 27 Proteins

name	Rps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27050 MGI:1350917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnu15-b (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:449631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG449630 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:449630 MGI:3645887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arrb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109689 MGI:99473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG245190 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245190 MGI:3646425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins

name	Slco2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101488 MGI:1351872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr520 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259066 MGI:3030354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr521 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258353 MGI:3030355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neu3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50877 MGI:1355305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spcs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66624 MGI:1913874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xrra1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:446101 MGI:2181647
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 2 Proteins

name	EG330602 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330602 MGI:3643844
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrdl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69121 MGI:1916371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pold3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67967 MGI:1915217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610209A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67164 MGI:1914414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57442 MGI:1891124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC631577 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631577
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	Pgm2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70974 MGI:1918224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx2-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14777 MGI:106627
definition	gene_synonym : AU041318 note : glutathione peroxidase 2, pseudogene 1 pseudo : _no_value

name	P4ha3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320452 MGI:2444049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppme1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72590 MGI:1919840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AU020772 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277939 MGI:2142166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257595 GeneID:14918 MGI:106030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : guanylate cyclase 2d transcript_id : XM_001474410.1

name	EG434215 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380875 GeneID:434215 MGI:3647721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins product : predicted gene, EG434215 transcript_id : XM_485967.3

name	2210018M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249083 GeneID:233545 MGI:1924203
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210018M11 gene transcript_id : NM_172280.2

name	LOC100040769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257613 GeneID:100040769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040769 transcript_id : XM_001474991.1

name	Prkrir (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469018 GeneID:72981 MGI:1920231
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) transcript_id : NM_028410.1

name	Wnt11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678588 GeneID:22411 MGI:101948
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-related MMTV integration site 11 transcript_id : NM_009519.1

name	Uvrag (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982283 GeneID:78610 MGI:1925860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UV radiation resistance associated gene transcript_id : NM_178635.2

name	EG666529 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257616 GeneID:666529 MGI:3647698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG666529, transcript variant 1 transcript_id : XM_001475155.1

name	EG666529 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380843 GeneID:666529 MGI:3647698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666529, transcript variant 2 transcript_id : XM_990504.1

name	Dgat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129808 GeneID:67800 MGI:1915050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol O-acyltransferase 2 transcript_id : NM_026384.3

name	Mogat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328427 GeneID:233549 MGI:2663253
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoacylglycerol O-acyltransferase 2 transcript_id : NM_177448.3

name	Mtap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113204612 GeneID:17760 MGI:1201690
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 6 transcript_id : NM_010837.3

name	Mtap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520591 GeneID:17760 MGI:1201690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 6 transcript_id : NM_001048167.1

name	Mtap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520593 GeneID:17760 MGI:1201690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 6 transcript_id : NM_001043355.2

name	Serpinh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753303 GeneID:12406 MGI:88283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine (or cysteine) peptidase inhibitor, clade H, member 1 transcript_id : NM_009825.1

name	Gdpd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52345430 GeneID:233552 MGI:2686926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycerophosphodiester phosphodiesterase domain containing 5 transcript_id : NM_201352.2

name	2810406K13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380877 GeneID:72184 MGI:1919434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 27 Proteins product : RIKEN cDNA 2810406K13 gene, transcript variant 1 transcript_id : XM_133597.5

name	Rps3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270974 GeneID:27050 MGI:1350917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S3 transcript_id : NM_012052.2

name	Arrb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750059 GeneID:109689 MGI:99473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arrestin, beta 1 transcript_id : NM_177231.2

name	Arrb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750060 GeneID:109689 MGI:99473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arrestin, beta 1 transcript_id : NM_178220.3

name	EG245190 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380878 GeneID:245190 MGI:3646425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins product : predicted gene, EG245190 transcript_id : XM_486328.4

name	Slco2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378388 GeneID:101488 MGI:1351872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 2b1 transcript_id : NM_175316.3

name	Olfr520 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128832 GeneID:259066 MGI:3030354
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 520 transcript_id : NM_147063.1

name	Olfr521 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129586 GeneID:258353 MGI:3030355
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 521 transcript_id : NM_146356.1

name	Neu3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131105 GeneID:50877 MGI:1355305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuraminidase 3 transcript_id : NM_016720.2

name	Spcs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364005 GeneID:66624 MGI:1913874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal peptidase complex subunit 2 homolog (S. cerevisiae) transcript_id : NM_025668.3

name	Xrra1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257605 GeneID:446101 MGI:2181647
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 2 Proteins product : X-ray radiation resistance associated 1 transcript_id : XM_194369.7

name	EG330602 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34303996 GeneID:330602 MGI:3643844
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG330602 transcript_id : NM_183313.1

name	Chrdl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982586 GeneID:69121 MGI:1916371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chordin-like 2 transcript_id : NM_133709.2

name	Pold3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802038 GeneID:67967 MGI:1915217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA-directed), delta 3, accessory subunit transcript_id : NM_133692.2

name	2610209A20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385513 GeneID:67164 MGI:1914414
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610209A20 gene transcript_id : NM_026010.1

name	Kcne3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386703 GeneID:57442 MGI:1891124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, gene 3 transcript_id : NM_020574.4

name	Pgm2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381668 GeneID:70974 MGI:1918224
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglucomutase 2-like 1 transcript_id : NM_027629.2

name	P4ha3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37674233 GeneID:320452 MGI:2444049
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III transcript_id : NM_177161.3

name	Ppme1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130470 GeneID:72590 MGI:1919840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase methylesterase 1 transcript_id : NM_028292.2

name	AU020772 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347499 GeneID:277939 MGI:2142166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU020772 transcript_id : NM_001017985.2

name	Gucy2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257596 GeneID:14918 MGI:106030
definition	codon_start : 1 product : guanylate cyclase 2d protein_id : XP_001474460.1

name	EG434215 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380876 GeneID:434215 MGI:3647721
definition	codon_start : 1 product : hypothetical protein protein_id : XP_485967.3

name	2210018M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249084 GeneID:233545 MGI:1924203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : EMSY protein protein_id : NP_758484.2

name	LOC100040769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257614 GeneID:100040769
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475041.1

name	Prkrir (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469019 CCDS:CCDS21474.1 GeneID:72981 MGI:1920231
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : interferon-inducible, double stranded RNA dependent inhibitor, protein-kinase protein_id : NP_082686.1

name	Wnt11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678589 CCDS:CCDS21475.1 GeneID:22411 MGI:101948
definition	GO_function : GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : wingless-related MMTV integration site 11 protein_id : NP_033545.1

name	Uvrag (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982284 CCDS:CCDS21476.1 GeneID:78610 MGI:1925860
definition	codon_start : 1 exception : mismatches in translation product : UV radiation resistance associated protein_id : NP_848750.2

name	EG666529 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380844 GeneID:666529 MGI:3647698
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_995598.1

name	EG666529 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257617 GeneID:666529 MGI:3647698
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001475205.1

name	Dgat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16975490 CCDS:CCDS21477.1 GeneID:67800 MGI:1915050
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] [Evidence IDA] GO_function : GO:0003846 - 2-acylglycerol O-acyltransferase activity [Evidence IDA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004144 - diacylglycerol O-acyltransferase activity [Evidence IDA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006071 - glycerol metabolism [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0019432 - triacylglycerol biosynthesis [Evidence ISS] [Evidence IMP] [Evidence IDA] codon_start : 1 note : diacylglycerol acyltransferase 2 product : diacylglycerol O-acyltransferase 2 protein_id : NP_080660.1

name	Mogat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28974982 CCDS:CCDS21478.1 GeneID:233549 MGI:2663253
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003846 - 2-acylglycerol O-acyltransferase activity [Evidence ISS] [Evidence IDA]; GO:0016407 - acetyltransferase activity [Evidence IDA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006651 - diacylglycerol biosynthesis [Evidence IDA]; GO:0006071 - glycerol metabolism [Evidence IEA]; GO:0050892 - intestinal absorption [Evidence IDA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IDA]; GO:0046462 - monoacylglycerol metabolism [Evidence ISS]; GO:0019432 - triacylglycerol biosynthesis [Evidence IDA] codon_start : 1 note : acyl CoA:monoacylglycerol acyltransferase 2; mannoside acetylglucosaminyltransferase 1-like product : monoacylglycerol O-acyltransferase 2 protein_id : NP_803231.1

name	Mtap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113204613 CCDS:CCDS21479.1 GeneID:17760 MGI:1201690
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA] GO_process : GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : microtubule-associated protein 6 isoform 1 protein_id : NP_034967.2

name	Mtap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520592 GeneID:17760 MGI:1201690
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA] GO_process : GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : microtubule-associated protein 6 isoform 2 protein_id : NP_001041632.1

name	Mtap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520594 GeneID:17760 MGI:1201690
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA] GO_process : GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : microtubule-associated protein 6 isoform 3 protein_id : NP_001036820.2

name	Serpinh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753304 CCDS:CCDS21480.1 GeneID:12406 MGI:88283
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IDA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 exception : mismatches in translation note : collagen binding protein 1; serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1; serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 2; beta enolase repressor factor 1; serine (or cysteine) proteinase inhibitor, clade H, member 2 product : serine (or cysteine) proteinase inhibitor, clade H, member 1 protein_id : NP_033955.1

name	Gdpd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52345431 CCDS:CCDS21481.1 GeneID:233552 MGI:2686926
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008889 - glycerophosphodiester phosphodiesterase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006071 - glycerol metabolism [Evidence IEA] codon_start : 1 product : glycerophosphodiester phosphodiesterase domain containing 5 protein_id : NP_958740.2

name	2810406K13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82907178 GeneID:72184 MGI:1919434
definition	codon_start : 1 product : hypothetical protein LOC72184 isoform 1 protein_id : XP_133597.3

name	Rps3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755372 GeneID:27050 MGI:1350917
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0015935 - small ribosomal subunit [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : ribosomal protein S3 protein_id : NP_036182.1

name	Arrb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30089716 GeneID:109689 MGI:99473
definition	GO_component : GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007600 - sensory perception [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant a; arrestin, beta 1, isoform B; beta-arrestin1 product : arrestin, beta 1 isoform A protein_id : NP_796205.1

name	Arrb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30089688 CCDS:CCDS21484.1 GeneID:109689 MGI:99473
definition	GO_component : GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007600 - sensory perception [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant b; arrestin, beta 1, isoform B; beta-arrestin1 product : arrestin, beta 1 isoform B protein_id : NP_835738.1

name	EG245190 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51829389 GeneID:245190 MGI:3646425
definition	codon_start : 1 product : similar to hCG1820409 protein_id : XP_486328.1

name	Slco2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789421 CCDS:CCDS21485.1 GeneID:101488 MGI:1351872
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 note : solute carrier family 21 (organic anion transporter), member 9 product : solute carrier organic anion transporter family, member 2b1 protein_id : NP_780525.1

name	Olfr520 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128833 CCDS:CCDS21486.1 GeneID:259066 MGI:3030354
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PBJ9-2411789-2412739; olfactory receptor MOR101-1 product : olfactory receptor 520 protein_id : NP_667274.1

name	Olfr521 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129587 CCDS:CCDS21487.1 GeneID:258353 MGI:3030355
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PBJ9-2443810-2444775; olfactory receptor MOR101-2 product : olfactory receptor 521 protein_id : NP_666468.1

name	Neu3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710068 CCDS:CCDS21489.1 GeneID:50877 MGI:1355305
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0016997 - alpha-sialidase activity [Evidence ISS]; GO:0004308 - exo-alpha-sialidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : membrane sialidase; ganglioside sialidase product : neuraminidase 3 protein_id : NP_057929.1

name	Spcs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385134 GeneID:66624 MGI:1913874
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA]; GO:0005787 - signal peptidase complex [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0009003 - signal peptidase activity [Evidence IEA] GO_process : GO:0006465 - signal peptide processing [Evidence IEA] codon_start : 1 product : signal peptidase complex subunit 2 homolog protein_id : NP_079944.1

name	Xrra1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82907272 GeneID:446101 MGI:2181647
definition	codon_start : 1 product : X-ray radiation resistance associated 1 protein_id : XP_194369.5

name	EG330602 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34303997 GeneID:330602 MGI:3643844
definition	codon_start : 1 product : hypothetical protein LOC330602 protein_id : NP_899136.1

name	Chrdl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982587 CCDS:CCDS21492.1 GeneID:69121 MGI:1916371
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0030514 - negative regulation of BMP signaling pathway [Evidence IDA]; GO:0001503 - ossification [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chordin like 2 product : chordin-like 2 protein_id : NP_598470.2

name	Pold3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789321 CCDS:CCDS21493.1 GeneID:67967 MGI:1915217
definition	GO_component : GO:0043625 - delta DNA polymerase complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003891 - delta DNA polymerase activity [Evidence ISS]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA]; GO:0000731 - DNA synthesis during DNA repair [Evidence ISS]; GO:0006298 - mismatch repair [Evidence ISS] codon_start : 1 note : GC12 product : polymerase (DNA directed), delta 3 protein_id : NP_598453.1

name	2610209A20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385514 CCDS:CCDS21494.1 GeneID:67164 MGI:1914414
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67164 protein_id : NP_080286.1

name	Kcne3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181220 CCDS:CCDS21495.1 GeneID:57442 MGI:1891124
definition	GO_component : GO:0008076 - voltage-gated potassium channel complex [Evidence ISS] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : minK-related peptide 2 product : potassium voltage-gated channel, Isk-related subfamily, gene 3 protein_id : NP_065599.1

name	Pgm2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076969 GeneID:70974 MGI:1918224
definition	GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0004614 - phosphoglucomutase activity [Evidence IEA] GO_process : GO:0006006 - glucose metabolism [Evidence IEA] codon_start : 1 product : phosphoglucomutase 2-like 1 protein_id : NP_081905.1

name	P4ha3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674234 CCDS:CCDS21496.1 GeneID:320452 MGI:2444049
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : collagen prolyl 4-hydroxylase alpha 3 protein_id : NP_796135.2

name	Ppme1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794138 GeneID:72590 MGI:1919840
definition	GO_function : GO:0016789 - carboxylic ester hydrolase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0051722 - protein C-terminal methylesterase activity [Evidence ISS]; GO:0051721 - protein phosphatase 2A binding [Evidence ISS]; GO:0008601 - protein phosphatase type 2A regulator activity [Evidence ISS]; GO:0004759 - serine esterase activity [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0006482 - protein amino acid demethylation [Evidence ISS] codon_start : 1 product : protein phosphatase methylesterase 1 protein_id : NP_082568.1

name	AU020772 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125347500 GeneID:277939 MGI:2142166
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC277939 protein_id : NP_001017985.2

name	LOC666978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666978
definition	number : 3 pseudo : _no_value

name	LOC666978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666978
definition	number : 2 pseudo : _no_value

name	LOC666978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666978
definition	number : 1 pseudo : _no_value

name	LOC631577 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631577
definition	number : 3 pseudo : _no_value

name	LOC631577 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631577
definition	number : 2 pseudo : _no_value

name	LOC631577 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631577
definition	number : 1 pseudo : _no_value

name	LOC100040721 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257611 GeneID:100040721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 2 Proteins product : similar to LSM6 homolog, U6 small nuclear RNA associated pseudo : _no_value transcript_id : XR_031994.1

name	A630091E08Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149257612 GeneID:233544 MGI:2442837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs product : RIKEN cDNA A630091E08 gene transcript_id : XR_035257.1

name	Rnu15-b (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:54111254 GeneID:449631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA, U15b small nucleolar transcript_id : NR_002173.1

name	EG449630 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:54111252 GeneID:449630 MGI:3645887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG449630 transcript_id : NR_002172.1

clone name	MSMg01-489N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-426F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-377J11.T7 (MSMg01no377_j11.b1)	MSMg01-377J11.TJ (MSMg01no377_j11.g1)
ACC	AG482636	AG482637
length	786	753
length of high quality (start - end)	381 (70 - 450)	454 (77 - 530)
definition	CHROMAT_FILE: MSMg01no377_j11.b1 PHD_FILE: MSMg01no377_j11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:17:49 2005	CHROMAT_FILE: MSMg01no377_j11.g1 PHD_FILE: MSMg01no377_j11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:17:50 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXATACAAAAGAGGATCC GCGGAATTCAGATTCTCGCTTCTTTGTTCAGACAAGCAGGAGGGAGGAGA AAAGCTGTTCTTCAGGCAGCAAAGCTTTTAGATAAACACCACAGAGGAAT TGGGTTCCTTCAGAGAAGAAACCAGATCCACTGGCTGATAGCGCCCGGGG GACAGGAGTGCAGTTCGGTCTGGCCAGGAAGCCAGCACTAAGGCCTCTTT ATCCAGCTTAGCACCTGCTGCCGGCCCTGGCAAGCAGGCAGCTCAGGTGA CTGGGCCCTGGTCCCTTGTGTAGGCCCCATCAGCTCCCAGGCTCCAGGAT GGCCAGACCCCACCCCCTCTCCCTCCTGACATCCCTTCCTAGTCTTTTAG ACCTGCGGGAACTGTGAACTGTTTTTCTTGAGGTGACCCCTCTTAGATCA CACACACTCACACTCACACTCTCTCTTTCACTTTCTCCTTTTTTCTTCTT ACACTATATACTACTTTTTACCTCACGTCTTTTGACTATTTCGTCCTCTC CATTATCCTTTCTACCGCCTTCCTTTTTCCCTTTTATCCTTCCTTCATCT TTTCCCTTCTCTCCCTTTCTTTACCTCGTGTTGTTGGACCCTCCTTTTTT CCCCTTTATTCTCTTTTTTTTTTTCCTTCCCCTCACCTCTTTTTTCCCTA ACTTGCTCCTTTTTTTTTTTCTCATAACCCTTCTATCTATCTTTTTCCAC TTCTTTTTTCCCCTCTCTTTTCCCTTTCTCCTTTCN	TTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXAATTTCAGCAGTGCAGTGATGGCG CATGCCTTTACTCCCAGCACTTGGAAGACAGAAGCAGGAGGATCTCTGTG AATTCTGGGCCAGCCTGGTCTGTAGAGTGAGTTCCAGAGAGCCTATACTA CACAGAGAGACCTTGTCTCAGAAAATAAATAAATTTAAATAAATTAAATT TTGACCTGGTGTTGGAATGCACACCTTTAATCCTAGTACTTGCGAGGCAG AAGCAAGCAGCTCTTTGTGACTTTGAGGCCAGCCTGGTCTACAGGGTGAG TTCCAGGACAGCCAGGACTACCCAGAAAAACACTGTCTTGGGGGGAAAAA AAAGAATTAAAAATTTCAGGGCAAAGTGGTACAAGTCTTTCACTCTAGGT TTTGTTTTGTTTTACTTTTTTTTTTTTAGAGATTTATTTATTTATTATAT GTAAGTACACTGTATCTGATTTCAGACACACCTGATGAGGGCAGTAGACC TCTTTATGGGTGGTTGTGAGCTCCCTCGTGCCTGCTTGTTTTTGATCTCA TTTATTTCCCAACATTTCCTGCCCCCCCACATTTCCGAACCCTTTCTTTT TTTTTTTTTTCACCTTTCTTTTCGCTCTTTTTCGTTTTTTCTTTTCTCTT TTTTTCCCCTTTTTTCCCCCCACCTCTCTTTTTATTTATATTTTTCCTCC CCC
quality values	Open. Hide. 10 17 8 6 6 8 8 8 9 9 9 20 29 37 19 16 9 7 11 8 19 16 19 18 24 16 26 30 59 22 15 15 8 6 6 7 7 9 8 8 8 8 10 15 18 15 18 14 17 19 31 43 44 23 21 18 21 22 19 16 9 9 10 9 9 9 9 9 12 20 23 28 32 28 34 30 29 28 28 22 22 31 30 50 42 43 59 57 47 47 47 47 48 48 48 59 59 59 68 68 68 57 57 57 57 54 48 57 48 48 41 42 41 41 41 48 47 42 42 39 43 43 43 59 59 57 57 47 47 37 39 44 57 46 48 48 47 47 57 57 57 47 47 47 47 48 42 41 41 41 50 50 47 47 47 57 57 57 57 57 50 43 43 43 50 43 37 37 35 37 37 52 57 52 52 52 57 57 54 54 57 57 57 54 54 54 57 57 57 52 52 43 50 43 52 47 59 43 57 50 50 50 50 50 50 57 52 52 52 52 52 57 57 57 52 52 52 43 52 57 44 43 29 29 29 43 43 43 50 57 50 57 47 47 47 48 57 57 59 59 48 48 48 57 57 59 59 59 57 57 57 36 36 25 44 44 57 59 59 57 54 54 57 59 59 59 59 59 59 59 54 48 57 48 48 48 59 59 59 57 59 59 59 59 59 59 59 59 57 57 57 59 48 57 48 48 48 48 48 48 48 48 57 48 59 48 48 59 59 59 41 28 15 18 11 11 10 10 10 9 11 9 12 16 30 34 50 59 59 59 48 48 48 59 59 57 57 57 57 57 57 59 59 59 48 48 48 48 50 43 43 35 35 35 37 37 43 43 43 43 43 43 47 48 57 57 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 57 54 47 43 47 44 42 42 42 42 42 35 35 35 37 28 26 17 11 11 19 19 36 40 40 40 28 28 25 36 32 44 42 35 35 44 44 44 57 43 43 32 36 28 41 41 43 43 47 48 47 47 48 54 54 32 32 19 20 20 28 24 25 21 19 15 15 15 19 15 23 12 15 12 8 8 10 10 10 8 10 9 8 8 8 8 8 14 12 12 8 8 8 8 8 8 10 10 8 8 8 8 10 12 14 16 12 8 8 12 8 8 8 10 8 8 8 8 8 6 6 8 8 10 8 8 6 6 8 8 9 8 8 10 8 11 8 8 8 8 8 6 6 6 6 9 10 10 10 10 10 10 12 8 8 8 10 9 8 8 8 8 19 10 10 9 8 8 8 9 9 8 10 10 8 8 8 8 8 8 10 16 22 15 12 10 10 11 16 16 11 8 8 8 8 8 10 10 10 10 11 12 10 9 10 10 10 12 10 10 10 14 17 20 30 21 16 10 10 10 12 11 8 6 6 8 8 8 9 12 9 11 11 10 8 6 6 6 8 11 8 8 10 10 8 8 9 11 12 11 11 8 8 8 8 8 8 8 10 10 14 14 14 15 16 19 23 11 12 10 10 10 8 9 9 9 10 15 15 13 13 18 18 18 9 12 11 8 8 10 14 10 13 13 10 8 8 8 8 6 6 7 12 12 22 15 11 10 8 8 8 11 8 8 8 8 8 8 8 8 8 10 10 17 18 28 24 25 12 10 9 9 9 9 10 12 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 10 8 8 8 10 13 18 9 8 8 8 8 8 10 8 9 9 11 11 14 12 12 11 11 8 8 8 6 11 10 22 22 19 18 13 11 14 13 10 10 12 20 13 19 18 15 3 0	Open. Hide. 7 7 6 6 6 8 11 10 10 9 9 9 11 12 9 9 9 9 15 15 29 26 25 27 25 28 27 32 41 27 16 18 9 9 9 9 9 9 23 21 15 15 15 23 25 37 32 31 21 21 11 11 11 19 21 41 41 25 22 10 13 8 8 8 12 14 23 28 46 46 28 28 30 28 35 30 33 33 36 42 37 34 34 34 42 44 57 57 57 57 57 68 68 68 68 68 48 48 47 47 54 50 50 68 68 68 68 68 68 68 68 68 51 50 47 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 46 46 46 46 48 57 68 68 68 48 48 46 46 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 52 52 52 62 62 62 62 68 68 68 68 68 68 68 62 62 62 43 39 39 35 43 43 62 59 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 52 52 52 52 57 57 39 39 39 59 59 57 57 57 57 57 57 68 59 59 57 57 57 59 59 68 57 57 57 57 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 50 50 43 50 52 57 43 43 43 47 47 50 54 54 57 57 57 57 57 57 57 43 43 43 46 57 59 59 57 57 43 43 44 57 57 57 54 57 57 57 54 57 57 48 48 48 48 48 37 37 37 44 59 48 54 54 59 59 59 59 54 54 54 59 48 37 34 32 23 23 32 32 43 46 57 57 48 48 48 48 48 48 48 39 37 22 22 20 20 19 27 28 39 43 36 31 31 23 23 23 23 13 8 8 8 10 10 22 34 37 32 34 25 28 18 20 11 8 8 8 8 8 8 9 9 9 9 9 13 13 12 10 9 9 9 9 9 9 15 7 12 9 7 10 8 9 11 11 13 18 23 12 12 13 16 19 16 25 13 10 10 8 8 8 9 10 10 10 13 10 11 11 12 15 13 11 11 10 9 10 9 9 10 10 11 10 10 10 10 10 8 8 8 8 8 8 15 8 8 8 8 8 8 10 10 9 9 8 8 8 8 11 15 30 30 29 29 8 8 6 6 8 8 10 10 12 8 8 8 8 11 8 8 9 8 8 10 10 12 11 12 8 8 8 8 10 8 10 14 8 8 8 8 8 10 6 6 8 8 8 10 8 8 8 8 8 10 10 12 12 15 10 8 6 6 7 7 13 8 8 8 8 8 8 10 10 12 14 15 13 13 8 8 8 8 10 15 10 11 16 16 25 20 16 12 9 9 11 15 9 9 9 9 10 17 10 10 10 10 8 7 11 6 6 8 8 9 9 8 8 8 8 10 8 8 8 8 8 10 11 12 12 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no377_j11.b1 MSMg01no377_j11.b1 CHROMAT_FILE:
MSMg01no377_j11.b1 PHD_FILE: MSMg01no377_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:49 2005
         (381 letters)



>mm_chr7_106572864_106573644
          Length = 781

 Score =  683 bits (353), Expect = 0.0
 Identities = 374/381 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctttgttcagacaagcaggagggaggagaaaagctgttcttcaggcagcaaagctttt 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 581 ttctttgttcagacaagcaggagggaggagaaaagctgttctccaggcagcaaagctttt 522

                                                                       
Query: 61  agataaacaccacagaggaattgggttccttcagagaagaaaccagatccactggctgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agataaacaccacagaggaattgggttccttcagagaagaaaccagatccactggctgat 462

                                                                       
Query: 121 agcgcccgggggacaggagtgcagttcggtctggccaggaagccagcactaaggcctctt 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 461 agcgcccgggggacaggagtgcagttcggtctggccgggaagccagcactaaggcctctt 402

                                                                       
Query: 181 tatccagcttagcacctgctgccggccctggcaagcaggcagctcaggtgactgggccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatccagcttagcacctgctgccggccctggcaagcaggcagctcaggtgactgggccct 342

                                                                       
Query: 241 ggtcccttgtgtaggccccatcagctcccaggctccaggatggccagaccccaccccctc 300
           ||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggtcccaggcgaaggccccatcagctcccaggctccaggatggccagaccccaccccctc 282

                                                                       
Query: 301 tccctcctgacatcccttcctagtcttttagacctgcgggaactgtgaactgtttttctt 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 281 tccctcctgacatcccttcctagtcttttagacctgtgggaactgtgaactgtttttctt 222

                                
Query: 361 gaggtgacccctcttagatca 381
           |||||||||||||||||||||
Sbjct: 221 gaggtgacccctcttagatca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space:   287184
Effective search space used:   287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information