NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTATCTATCTATCTATTTATCTCTCTCTCTCTCTCTCTATCTA
TCTATCTATCTATCTCTATATATAATACAAACAAGCCTCACAGTCAACAA
CAGTCAACACTAGTAAAGGATTCTGTCCTGCTGGCTCTGGCAAAAGGAAA
CTTCTACAAGGTAGATACAGAAGACCATGATAAAAACAGAACTGAATGCT
CTCAACACTGGTCAATGTGCAAGGCTGTTGAACAAGTTGAGAAGAAAATG
GTTAATTCTATCCATTGCTATGAGGTCATTGGTGCTATGATGGGGGAACA
ATAAAAGAATGTAATTGTTGGATAACTGATTATAAATATAGAAACACTTT
GTTATTTTGGACATTGAAAGTAGTGATGAGAACTAGATGAAGAATGTATT
AGTATGGAGCCACAAATATAGCTCAGCAGATGAAGGTGACTTCCTGGGAA
CCAAATTTCAGTCCATAGACCCCTCAATAAAGATAAAAGATGTTTAATCC
TTTCGTTGCTCTCTGACCTCCCCATGCAAACTGTGACATCAGTATGCCCA
TGTGGGGCCTTGGGTGTGTGGAAAAAAAGGAAACCGAGTAAGAACCACCC
CCCTGTCCGATTTTATTGCTCCCGTTTCCAATTCTTCATTTTTACCCCGA
TTGCTTTTCCTGCTATTTTACCCCGCCTCTTTCCTTCGCTTTTACATTAC
CCTCCCTTTTCCATTTCGCCGACAGTCCN

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTCCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TAAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATTTATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCCTCAGAGGAATGTATACCGAAAA
TGTGGTATATCTACACCACGGAGGACAACTCCGCTTTTTTTAAGAAAGGA
TTTTTTGAAATTCCCTGCCCAATGGATGGTCCGGGAGGGGTTCTTCCTCG
CTGGGTGGAAACCTTTCTCAAAGGACACTCCTAAACCTGGTCCTTCGTTT
TAATGTATATAACCCCCCCCTTCTTATCCCCATACTTATTTGTTTATTTT
TTTATTTATTGGCACTCCTCTAAACATTTTATTTCTTTGTGTTTTTACCC
CCCTCTCTTTGTTGGCGTTACAATCCTTTCTGTCCCCTTTTTG

Query= MSMg01no377_o24.b1 MSMg01no377_o24.b1 CHROMAT_FILE:
MSMg01no377_o24.b1 PHD_FILE: MSMg01no377_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:18 2005
         (456 letters)



>mm_chr7_101998904_101999759
          Length = 856

 Score =  793 bits (410), Expect = 0.0
 Identities = 436/452 (96%), Gaps = 12/452 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatctatctatctatttatctctctctctctctctctatctatctatctatcta 64
           ||||||||||||||||||||            ||| ||| ||||||||||||||||||||
Sbjct: 217 gaattctatctatctatcta------------tctatctatctatctatctatctatcta 264

                                                                       
Query: 65  tctctatatataatacaaacaagcctcacagtcaacaacagtcaacactagtaaaggatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctctatatataatacaaacaagcctcacagtcaacaacagtcaacactagtaaaggatt 324

                                                                       
Query: 125 ctgtcctgctggctctggcaaaaggaaacttctacaaggtagatacagaagaccatgata 184
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 ctgtcctgctggctctggcaaaaggaaactcctacaaggtagatacagaagaccatgata 384

                                                                       
Query: 185 aaaacagaactgaatgctctcaacactggtcaatgtgcaaggctgttgaacaagttgaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaacagaactgaatgctctcaacactggtcaatgtgcaaggctgttgaacaagttgaga 444

                                                                       
Query: 245 agaaaatggttaattctatccattgctatgaggtcattggtgctatgatgggggaacaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaaatggttaattctatccattgctatgaggtcattggtgctatgatgggggaacaat 504

                                                                       
Query: 305 aaaagaatgtaattgttggataactgattataaatatagaaacactttgttattttggac 364
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaagaatgtaattgttggacaactgattataaatatagaaacactttgttattttggac 564

                                                                       
Query: 365 attgaaagtagtgatgagaactagatgaagaatgtattagtatggagccacaaatatagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attgaaagtagtgatgagaactagatgaagaatgtattagtatggagccacaaatatagc 624

                                           
Query: 425 tcagcagatgaaggtgacttcctgggaaccaa 456
           ||||||||||||||||||||||||||||||||
Sbjct: 625 tcagcagatgaaggtgacttcctgggaaccaa 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)