Query= MSMg01no378_e03.b1 MSMg01no378_e03.b1 CHROMAT_FILE:
MSMg01no378_e03.b1 PHD_FILE: MSMg01no378_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:42 2005
(626 letters)
>mm_chr7_121520887_121521912
Length = 1026
Score = 1145 bits (592), Expect = 0.0
Identities = 614/624 (98%), Gaps = 5/624 (0%)
Strand = Plus / Plus
Query: 8 ttcaattttgggacataggactagataaagtcctaaaacttgtcaaggtgctagctgagg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcaattttgggacataggactagataaagtcctaaaacttgtcaaggtgctagctgagg 267
Query: 68 ttttgagaggattaaaattggtaccagaggtgggagaggatagaatcagctgcattggaa 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttttgagaggattaaaattggtaccagaggtgggagaggatagaatcagctgcattggaa 327
Query: 128 aaccactgcaaacctggggtctctggttcatcttaatgacctctcttatacgcaagagaa 187
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 328 aaccactgcaaacctggggtctctggttcatcttaatgacctctcttatatgcaagagaa 387
Query: 188 gacttaaagaagatctgtatgttaaatctgcataaaagaacttatctgtccagattaaag 247
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 388 gacttaaagaagatctgtatgttaaatctgcataaaagaacgtatctgtccagattaaag 447
Query: 248 tgaaccataacaaccatcaaaatgtgccacccaaatcttctactgtggggaacataattg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgaaccataacaaccatcaaaatgtgccacccaaatcttctactgtggggaacataattg 507
Query: 308 actggggccttagctgtcttaatacattttgcatttctcttattcagtgtaggcagaggt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 actggggccttagctgtcttaatacattttgcatttctcttattcagtgtaggcagaggt 567
Query: 368 aata-----gacccattactattttaaaaggagctcttctatttaaaacctgacttcatc 422
|||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 568 aatattatagacccatcactattttaaaagaagctcttctatttaaaacctgacttcatc 627
Query: 423 ctgtggacttcataatggcttggctaagaacttccttggagtcattctaaagtctaatat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctgtggacttcataatggcttggctaagaacttccttggagtcattctaaagtctaatat 687
Query: 483 tctttctacttcgtttcctttcttctcctacatcctctatcttcagactgatatcacagt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tctttctacttcgtttcctttcttctcctacatcctctatcttcagactgatatcacagt 747
Query: 543 ctgaaacatcttcctactttacttaatcttcccctatccttcagtggtacctctcttagt 602
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctgaaacatcttcctactttacataatcttcccctatccttcagtggtacctctcttagt 807
Query: 603 aaatctcttgaatgtctaattctg 626
||||||||||||||||||||||||
Sbjct: 808 aaatctcttgaatgtctaattctg 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_e03.g1 MSMg01no378_e03.g1 CHROMAT_FILE:
MSMg01no378_e03.g1 PHD_FILE: MSMg01no378_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:42 2005
(453 letters)
>mm_chr7_121669471_121670327
Length = 857
Score = 864 bits (447), Expect = 0.0
Identities = 453/457 (99%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 1 tgacaccagattgatgctttcttgctaggactaataaatacctgaaaaccctaagtttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgacaccagattgatgctttcttgctaggactaataaatacctgaaaaccctaagtttat 598
Query: 61 aattttctaaacatttgttcttaagggctaaacatagtagtcatacaaaattctagcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aattttctaaacatttgttcttaagggctaaacatagtagtcatacaaaattctagcacc 538
Query: 121 aagaagaggaagtagacaaagccctgcccgtaaccaggaagctactgtaactgaaacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aagaagaggaagtagacaaagccctgcccgtaaccaggaagctactgtaactgaaacttc 478
Query: 181 ctgggaaagggaaagtcagctttctccagtggagtataaaattaggtataccataagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctgggaaagggaaagtcagctttctccagtggagtataaaattaggtataccataagtca 418
Query: 241 cactccaggacaggccctatacccaagggtagttaactaaaacacagactctgtattttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cactccaggacaggccctatacccaagggtagttaactaaaacacagactctgtattttg 358
Query: 301 ggggatgtgtttgtgtgtggtatcttgttaccttttctctaattttcttttttcaaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggggatgtgtttgtgtgtggtatcttgttaccttttctctaattttcttttttcaaagtt 298
Query: 361 tgatgtgattttatttttgttgttattttttcttgttttttgagagccagacaga----a 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 297 tgatgtgattttatttttgttgttattttttcttgttttttgagagccagacagacagaa 238
Query: 417 ggaacaagtagttgggtaggtattaaggtgaggaggg 453
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggaacaagtagttgggtaggtattaaggtgaggaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 857
Length adjustment: 10
Effective length of query: 443
Effective length of database: 847
Effective search space: 375221
Effective search space used: 375221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
