Query= MSMg01no379_c12.b1 MSMg01no379_c12.b1 CHROMAT_FILE:
MSMg01no379_c12.b1 PHD_FILE: MSMg01no379_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:50 2005
(244 letters)
>mm_chr7_30248919_30249562
Length = 644
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Minus
Query: 1 cagctaggaaaggcaactatgtgcgcccctctccccaactcccatcactggccttcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctaggaaaggcaactatgtgcgcccctctccccaactcccatcactggccttcatat 382
Query: 61 ggcctggtggtgtctgaagagccacgtgttgccctagggctctcaaaggtagacctgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcctggtggtgtctgaagagccacgtgttgccctagggctctcaaaggtagacctgagg 322
Query: 121 agacagcttcttaggtatgcctttgccaggattccaaggaatgccacctcgtgtttctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacagcttcttaggtatgcctttgccaggattccaaggaatgccacctcgtgtttctga 262
Query: 181 gactccgtagatggatttccacgtcatttcagacccatatttcattctgtgaatggggga 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactccgtagatggatttccatgtcatttcagacccatatttcattctgtgaatggggga 202
Query: 241 t 241
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no379_c12.g1 MSMg01no379_c12.g1 CHROMAT_FILE:
MSMg01no379_c12.g1 PHD_FILE: MSMg01no379_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:50 2005
(347 letters)
>mm_chr7_30065588_30066333
Length = 746
Score = 640 bits (331), Expect = 0.0
Identities = 343/347 (98%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 1 aggaacctgtctagtcttgagtcagccacgaccaccattcttacagaccctcagcgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaacctgtctagtcttgagtcagccacgaccaccattcttacagaccctcagcgggga 260
Query: 61 ctcaattaagtttgctcaatcaatgaattctttcaaaagagatcttttcaaagctggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaattaagtttgctcaatcaatgaattctttcaaaagagatcttttcaaagctggcta 320
Query: 121 gtggttgtctgaagcagttaaaagttgtaaggactcctaaagacgcaaaccccagctgct 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gtggttgtctgaagcagttaaaagttgtaacgactcctaaagacgcaaaccccagctgct 380
Query: 181 gggtgccaatactacactcggagaacagacgttcctgcattggcaggcaccttggcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgccaatactacactcggagaacagacgttcctgcattggcaggcaccttggcaaag 440
Query: 241 ctcctcccttctaccaaccgctgcttctcttcttccacgggagatcatgggggctgttgc 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 441 ctcctcccttctaccaaccgctgcttctcttcttcctcgggagatcatgggg-ctgttgc 499
Query: 301 catatgtgatatcaacaggtgtccgaagtacgttttccctgtaccca 347
||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 catatgtgatatcaacaggtgtccgaagtgcgttttccctgtaccca 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
