Query= MSMg01no380_i15.b1 MSMg01no380_i15.b1 CHROMAT_FILE:
MSMg01no380_i15.b1 PHD_FILE: MSMg01no380_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:39 2005
(327 letters)
>mm_chr7_76070483_76071209
Length = 727
Score = 632 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Minus
Query: 1 ctttgagctggctaaaaggagttcaaaaattctattataaacaaccagagaaaatgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctttgagctggctaaaaggagttcaaaaattctattataaacaaccagagaaaatgtatt 468
Query: 61 cgggctacctaaagcatacgaggataatacattcctaagtactttgaagaaaaactgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cgggctacctaaagcatacgaggataatacattcctaagtactttgaagaaaaactgaag 408
Query: 121 caaatgtactagacttcctactttttcataatggaatgaactaaattacccattgtatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 caaatgtactagacttcctactttttcataatggaatgaactaaattacccattgtatgg 348
Query: 181 gaaccacacataaaagcctttctctccataagtgatagatcaaagggagggaagatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaaccacacataaaagcctttctctccataagtgatagatcaaagggagggaagatgagt 288
Query: 241 ggtccacgggcacagaccacgcctctggaattcagagaccacggatcagcagtctgcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggtccacgggcacagaccacgcctctggaattcagagaccacggatcagcagtctgcatt 228
Query: 301 ttaactacatctccttgacatgaaaca 327
|||||||||||||||||||||||||||
Sbjct: 227 ttaactacatctccttgacatgaaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_i15.g1 MSMg01no380_i15.g1 CHROMAT_FILE:
MSMg01no380_i15.g1 PHD_FILE: MSMg01no380_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:39 2005
(515 letters)
>mm_chr7_75884350_75885264
Length = 915
Score = 913 bits (472), Expect = 0.0
Identities = 504/520 (96%), Gaps = 10/520 (1%)
Strand = Plus / Plus
Query: 1 tctatcttctgtggcaaaataaaacatcatcaaggcaatccacaatgctgcatgacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatcttctgtggcaaaataaaacatcatcaaggcaatccacaatgctgcatgacatag 260
Query: 61 ctcacaagcaaatcaccagaaaacgcggtaagtggctgtgataatctaacactgtaagga 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcacaagcaagtcaccagaaaacgcggtaagtggctgtgataatctaacactgtaagga 320
Query: 121 caagtttatacgcataccctaccaactatgagtcagcagcagcacactaatgagtggagg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 caagtttatacgcataccctaccaactaggagtcagcagcagcacactaatgagtggagg 380
Query: 181 ggagtgtctgcagacagcgtaatgagtctaattttctttacctctgaataaaggggggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagtgtctgcagacagcgtaatgagtctaattttctttacctctgaataaaggggggga 440
Query: 241 ggctgtttttg-----gaattcttgtatgcaggcaaacattgagtagcaggcttccccgt 295
||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctg-----gaaacggaattcttgtatgcaggcaaacattgagtagcaggcttccccgt 495
Query: 296 cacagtcggagggctgagggtacggaggaacgtgtcgggagaattcttcttctgttacca 355
||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 496 cacagtcagagggctgagggtacggaggaacgtgtcgggagaattcttcttccgatacca 555
Query: 356 catctgcataatttggtggtgctgaaacgggaatggagtttgagctaagagagccatgta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 catctgcataatttggtggtgctgaaacgggaatggagtttgagctaagagagccatgta 615
Query: 416 aaaatgcaaaaatcactactttgtgtcttctgaacccttacaaaagcaagagatggagtc 475
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 616 aaaatgcaaaaatcactactttgtgtcttctgaacccttataaaagcaagagatggagtc 675
Query: 476 aaacaagagatattatggccaccacaagacaagttttggt 515
||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaacaagagatattatggccaccacaagacaagttttggt 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
