Query= MSMg01no381_n23.b1 MSMg01no381_n23.b1 CHROMAT_FILE:
MSMg01no381_n23.b1 PHD_FILE: MSMg01no381_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:25 2005
(426 letters)
>mm_chr7_84714674_84715499
Length = 826
Score = 787 bits (407), Expect = 0.0
Identities = 419/423 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttttttattacacaagcatgtctaataatatacaagtgggttgagtggttctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttttattacacaagcatgtctaataatatacaagtgggttgagtggttctg 263
Query: 64 ctgatgaaagatggggaaccagcccatatatgtatatgatcagccctgtgtctgtttgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgatgaaagatggggaaccagcccatatatgtatatgatcagccctgtgtctgtttgct 323
Query: 124 ggcctgacttaccttatctggcctcttgtaggatgcaggcaaaagatatgggatgattga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggcctgacttaccttatctggcctcttgtaggatgcaggcaaaagatatgggatgattga 383
Query: 184 attctaggacactggtctcatcctgcaacaggtcaagatagatgaagattcataacagag 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 384 attctaggacactggtctcatcctgcaacaggtcaatctagatgaagattcataacggag 443
Query: 244 tcatgggagtcatagaaaagcagaaggtcctggtaggatggctctgaatgttcatcctct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatgggagtcatagaaaagcagaaggtcctggtaggatggctctgaatgttcatcctct 503
Query: 304 cattccattatagtttgttaactggagaaagtcaaacaaaactcaggtttaagggaacag 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 cattccattatagtttgttaactggagaaagccaaacaaaactcaggtttaagggaacag 563
Query: 364 ctttaaaatcatactgcaaagggcatagtgatggagttgtagccattttggcaattatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctttaaaatcatactgcaaagggcatagtgatggagttgtagccattttggcaattatta 623
Query: 424 tat 426
|||
Sbjct: 624 tat 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_n23.g1 MSMg01no381_n23.g1 CHROMAT_FILE:
MSMg01no381_n23.g1 PHD_FILE: MSMg01no381_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:25 2005
(399 letters)
>mm_chr7_84846701_84847499
Length = 799
Score = 563 bits (291), Expect = e-165
Identities = 350/405 (86%), Gaps = 54/405 (13%)
Strand = Plus / Minus
Query: 1 tgattttagtagaagaaaaaaatgtgtaacttctaataaaaaacaaatgtgaaccaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgattttagtagaagaaaaaaatgtgtaacttctaataaaaaacaaatgtgaaccaggat 346
Query: 61 atgttccttgcgtactaggacatactttcctctagtttgtatttaattgagtaaaattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atgttccttgcgtactaggacatactttcctctagtttgtatttaattgagtaaaattga 286
Query: 121 aactaattaaaactggaatgtttctattgatgactgttttcatgccttgggttgtgtact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aactaattaaaactggaatgtttctattgatgactgttttcatgccttgggttgtgtact 226
Query: 181 tgccttagagatccatgatcatccaaatatatatatatatatatatatatat-------- 232
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 225 tgccttagagatccatgatcatccatatatatatatatatatatatatatatatgtatgt 166
Query: 233 ----------------------------------------------tgctgattcaattc 246
||||||||||||||
Sbjct: 165 atgtatgtatgtatgtatgtatgtatatatatatatatatatatattgctgattcaattc 106
Query: 247 actgaagcctatgactgtaatttttcatgcatgtagccaatgtctgcaacacatcccagt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 actgaagcctatgactgtaatttttcatgcatgtagccaatgtctgcaacacatcccagt 46
Query: 307 gttgggtcaggaaacacacaagggaactcttgacctttttatgca 351
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 gttgggtcaggaaacacacaagggaactcttgacctttttatgca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
