Query= MSMg01no383_l23.b1 MSMg01no383_l23.b1 CHROMAT_FILE:
MSMg01no383_l23.b1 PHD_FILE: MSMg01no383_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:52 2005
(422 letters)
>mm_chr7_57584738_57585559
Length = 822
Score = 729 bits (377), Expect = 0.0
Identities = 386/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 5 gaattcactatatggtccaaggacaatagtaacacactggtaaaattcaaagccagatcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaattcactatatggcccaaggacaatagtaacacactggtaaaattcaaagccagatcc 329
Query: 65 aagcccacctatcagagaaaatatgcatactattacaaacagtagttagcaaagagcaag 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 328 aagcccacctatcagagaaaatatgcatactattacaaatagtagttagcaaagagcaag 269
Query: 125 cccaccatggtaacacctactactttggctgttatctctctagagcagctgtcctcaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cccaccatggtaacacctactactttggctgttatctctctagagcagctgtcctcaata 209
Query: 185 tgtaggtcaagcaaccctttcacaagggtcaccaagaccattgggggaaaaaaaagaaca 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 208 tgtaggtcaagcaaccctttcacaagggtcaccaagaccattggggg-aaaaaaagaaca 150
Query: 245 ctagcaaaattacagttatgaagtggcaacaaaagtaattttatggtgtgggtcaccaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctagcaaaattacagttatgaagtggcaacaaaagtaattttatggtgtgggtcaccaca 90
Query: 305 acaagaaaaactgtattaaagggtcacagctttaggaaggttggaaaccactgcatccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 acaagaaaaactgtattaaagggtcacagctttaggaaggttggaaaccactgcatccat 30
Query: 365 cacaggttagcttgccactgcaaattaaa 393
|||||||||||||||||||||||||||||
Sbjct: 29 cacaggttagcttgccactgcaaattaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_l23.g1 MSMg01no383_l23.g1 CHROMAT_FILE:
MSMg01no383_l23.g1 PHD_FILE: MSMg01no383_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:52 2005
(360 letters)
>mm_chr7_57362296_57363055
Length = 760
Score = 688 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Plus
Query: 1 tcactttgagacttgattatctggccagagatcccaggcattttgaaaagacatacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactttgagacttgattatctggccagagatcccaggcattttgaaaagacatacctaa 260
Query: 61 attataatttcaaagcttaaaggtcaaaaatacatatacttgcacttagagtgttccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attataatttcaaagcttaaaggtcaaaaatacatatacttgcacttagagtgttccaat 320
Query: 121 ttctgttaatgtctgaaaaatggttcccaaacttttaatgcttctgggttctctgggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgttaatgtctgaaaaatggttcccaaacttttaatgcttctgggttctctgggtta 380
Query: 181 aggatttggacatagcccaaaggagaaggcttcttggtgcttcatgacatttgtggctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggatttggacatagcccaaaggagaaggcttcttggtgcttcatgacatttgtggctcc 440
Query: 241 agctgtggggattaggtggtgggggaagtcatctagaggagcttccatgctgctttatat 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 agctgtggggattaggtggtgggggaagtgatctagaggagcttccatgctgctttatat 500
Query: 301 cagctattggctgatgtcccagtttctgtgccaagaagagcatctggctgatgcctcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagctattggctgatgtcccagtttctgtgccaagaagagcatctggctgatgcctcctt 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
