XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTATGTTAT
CCCTATTCAAACATTCCCAAGGTGTTTCCTCACTTTATCTTTATAAAACG
CCGAAACACACACTCTCCCTCTTTTAGAGATTTTATTATTATTATTACAT
TTTAAATTGCATTTATTTTTATGTATGGGTATGGGTTGGCACATGTCAGA
GAGAGGGCAACCAGCAGAACTTGGAGCTCACATTTTACCACGTGGGGTGC
TCAATGAGCCTCTATGCCTGTATAGCCCCTTTAAATTTGTTTTCAGCGAC
AATATACATAGTTGTAAAATAGAGTCTGGTTATTCAATGCATGCATATTC
TGTGTGGAGGTAAAACCAGTCGTATTGACACTTCCATTTCTTAAACAGTT
ACCATTTATTTGTGTTTGGAGACTATGAGTTTCTCTCTTATATTTAATTT
AAAACATATTATCCATTGCAAATTATATTCACCCAATTTTACTGTCAAAT
CTGAGAATTGATTTTCCCTTCTATAATTGTATTTTGATATGTACTATCCA
AGCTTTCTGGTTGCTGGCTTATCTCATTTAACGACTTCCAGCTGCACTCA
TTTGGCTGCAAGCGTGCTATTACAAACTCATACAGTGTGTAAGATTGCCC
TTCTCTCTCCCAGATGGACAGCACTGGGATATTTTTCTTGTATAAAAATG
GCCCCCCTGAGTAGGGTGAGGGGGAAACTAGGAATTTCTGTTCCCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXAATAAGAATGTTACCTATTCAATAACATTCGAATTCAC
TTCTAGGAGAGACAGTGAAAGTAATCAGGCATTACAAAGTACAGAGCTGG
GAAAGCTCAGGGCTAATCTGCATAGTAATTGCTTAGAACAAAAGCTGAGT
CACACCCAAACACCAGGATACACAATGGCCTAGCTAATAGGTGGGTTGTC
CCATGAAAGAGTTAGTGGAAGGGAATTCCCCTGGTATAGGTTTCTTCACT
AGGCCCAGAGGAATAACATAATCAGGTATCTACTAAAGAACCCCTGGTGG
TGGGTTTAACAATAGAATAGCATTGCATCAGAGCATTCATCTGGCTCCAT
TTTAAGTGGTGAATGTGGCCTGATCCCTGTCACCTTTTTATGTATGTATT
CTTTTTTTTATGCTTTGTTGTGTGTCAATGTAACTTGGTGGATGTGTTTG
CCTGGCTTTTCTTTCTTTCTTTTTTTCTTCTGGGGTTCATTTGGACGATA
CATTCAGATCTACCCTCCCTTGTGTCATGTCTGTTTGTACCCCATTCTCA
CCCACTGCATGTTTGCCTGCAACCAAAACCTCGTTCCCACAGATAGGAGA
ACCAATAGAGGTTAGACTGCGGCAGTTACAGTGTCGTGGGTAAATCTTCT
ATATTGGTTGGGGGGGGATTAAATGTGCCTTAACACGCGCTTTGG

Query= MSMg01no384_j19.b1 MSMg01no384_j19.b1 CHROMAT_FILE:
MSMg01no384_j19.b1 PHD_FILE: MSMg01no384_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:57 2005
         (561 letters)



>mm_chr7_101953063_101954023
          Length = 961

 Score =  924 bits (478), Expect = 0.0
 Identities = 538/558 (96%), Gaps = 1/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctatgttatccctattcaaacattcccaaggtgtttcctcactttatctttata 63
           ||||||||||| ||||| |||||||||||| |||||||| |||||||||| |||||||||
Sbjct: 622 ggaattctatgctatccatattcaaacatttccaaggtgcttcctcacttcatctttata 563

                                                                       
Query: 64  aaacgccgaaacacacactctccctcttttagagattttattattattattacattttaa 123
           ||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 562 aaatgccgaaacacacactctccctcttttagagatttt-tttttattattacattttaa 504

                                                                       
Query: 124 attgcatttatttttatgtatgggtatgggttggcacatgtcagagagagggcaaccagc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgcatttatttttatgtatgggtatgggttggcacatgtcagagagagggcaaccagc 444

                                                                       
Query: 184 agaacttggagctcacattttaccacgtggggtgctcaatgagcctctatgcctgtatag 243
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggacttggagctcacattttaccacgtggggtgctcaatgagcctctatgcctgtatag 384

                                                                       
Query: 244 cccctttaaatttgttttcagcgacaatatacatagttgtaaaatagagtctggttattc 303
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 cccctttaaatttgttttcagcgacaatatacatagttgtgaaatagagtctggttattc 324

                                                                       
Query: 304 aatgcatgcatattctgtgtggaggtaaaaccagtcgtattgacacttccatttcttaaa 363
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatgtatgcatattctgtgtggaggtaaaaccagtcgtattgacacttccatttcttaaa 264

                                                                       
Query: 364 cagttaccatttatttgtgtttggagactatgagtttctctcttatatttaatttaaaac 423
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cagttaccatttacttgtgtttggagactatgagtttctctcttatatttaatttaaaac 204

                                                                       
Query: 424 atattatccattgcaaattatattcacccaattttactgtcaaatctgagaattgatttt 483
           |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 203 atattagccattgcaaattatattcaccctattttactgtcaaatctgagaattgatttc 144

                                                                       
Query: 484 cccttctataattgtattttgatatgtactatccaagctttctggttgctggcttatctc 543
           |||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||||
Sbjct: 143 cccttctacaattgtattttgatatgtagtatccaagctttctagttgttggcttatctc 84

                             
Query: 544 atttaacgacttccagct 561
           |||||| |||||||||||
Sbjct: 83  atttaatgacttccagct 66


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)