Query= MSMg01no384_n23.b1 MSMg01no384_n23.b1 CHROMAT_FILE:
MSMg01no384_n23.b1 PHD_FILE: MSMg01no384_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:16 2005
(477 letters)
>mm_chr7_107834013_107834893
Length = 881
Score = 820 bits (424), Expect = 0.0
Identities = 465/480 (96%), Gaps = 6/480 (1%)
Strand = Plus / Minus
Query: 3 cggaattcttccttccccctgcccaccctactaaaagtgcctgtccctagcatttatgtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cggaattcttccttccccctgcccaccctactaaaagtgcctgtccctagcatttatgtc 614
Query: 63 agcaaaatacattctttttccattttgccattatttttcctgggaccctggtcacagtgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agcaaaatacattctttttccattttgccattatttttcctgggaccctggtcacagtgc 554
Query: 123 agctgggtagcagtttttggaattgttcctgccctacttctcatcttgaacgtttctctc 182
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 553 agctgggtagcagtttttggaattgctcctgccctacttctcatcttgaacgtttctccc 494
Query: 183 tattacagttattttatatttgcacctctgtgccaggactgctggtttataagaccttga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tattacagttattttatatttgcacctctgtgccaggactgctggtttataagaccttga 434
Query: 243 gacagagatactagaaggaacacaaaccagccttcaccatgtcact-gactctgaagcag 301
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 433 gacagagatactagaaggaacacaaaccagccttcaccatgtcactggactctgaagcag 374
Query: 302 gcctccaagaggaagctgggctggaccaggtctgcaggcctaccagcgccatctgccggc 361
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 373 gcctccaagagaaagctgggctgggccaggtctgcaggcctaccagcgccatctgccggc 314
Query: 362 taaatcctacatcttctgtctcaagatagatct---ccaccacctgcgacagcaagtagc 418
|| ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||
Sbjct: 313 taggtcctacatcttctgtctcaagctagatctccaccaccacctgggacagcaagtagc 254
Query: 419 ccttaggttgttcctttattttgtaatctgggaatcaaaggcagggcttta-aatgtgct 477
|||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 253 ccttagattgttcctttattttgtaatctgggaatcaaaggcagggctttacaa-gtgct 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 881
Length adjustment: 10
Effective length of query: 467
Effective length of database: 871
Effective search space: 406757
Effective search space used: 406757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_n23.g1 MSMg01no384_n23.g1 CHROMAT_FILE:
MSMg01no384_n23.g1 PHD_FILE: MSMg01no384_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:16 2005
(442 letters)
>mm_chr7_107659516_107660357
Length = 842
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%)
Strand = Plus / Plus
Query: 1 tgaacttgcaaatttgcaaatcctgaaaagtcaggactggagaagccatcgtctagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacttgcaaatttgcaaatcctgaaaagtcaggactggagaagccatcgtctagctgt 260
Query: 61 tctaataaacactagccacaatcaaagccccccaagaccatgccctagagaagccagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaataaacactagccacaatcaaagccccccaagaccatgccctagagaagccagctg 320
Query: 121 ggcagctgttcttcgccaggtagtgagtcaccctcatcccacacaactgatttccaaagg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagctgttctttgccaggtagtgagtcaccctcatcccacacaactgatttccaaagg 380
Query: 181 atgaggtctggtggctctaagctgctccttgaccctctgctcctgatgtctctggagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaggtctggtggctctaagctgctccttgaccctctgctcctgatgtctctggagagt 440
Query: 241 ctaggaagataaatcagaaggtctgttctgcctccgccctctgtcgctggcagccggcat 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ctaggaagataaatcagaaggtctgttctgcctctgccctctgtcgctggcagccggcat 500
Query: 301 cctccgccaagcctcaggaaggctcctgtctgccggcagaggaactcaccccacttctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctccgccaagcctcaggaaggctcctgtctgccggcagaggaactcaccccacttctgt 560
Query: 361 accgccttggctgggggagccataagcccatcctcctgacttgtaccatcctggtttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accgccttggctgggggagccataagcccatcctcctgacttgtaccatcctggtttgcc 620
Query: 421 cttagtttgtctagatgctggg 442
||||||||||||||||||||||
Sbjct: 621 cttagtttgtctagatgctggg 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
