Query= MSMg01no385_a02.b1 MSMg01no385_a02.b1 CHROMAT_FILE:
MSMg01no385_a02.b1 PHD_FILE: MSMg01no385_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:27 2005
(591 letters)
>mm_chr7_81830230_81831220
Length = 991
Score = 899 bits (465), Expect = 0.0
Identities = 487/495 (98%), Gaps = 4/495 (0%)
Strand = Plus / Minus
Query: 8 caaggttggagacatcggggtgagtatcctgttgagtatgtatgcagttgggccacagat 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 caaggttggagacatcggggtgagtatcctgttgagtatgtatgcagttgggccacagat 433
Query: 68 tgcccgttacattggaggtattaaatcaaatgcattgggtgagatactggaggaatgagg 127
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgcctgttacattggaggtattaaatcaaatgcattgggtgagatactggaggaatgagg 373
Query: 128 gcacactttggtgacagtggtcatcatggctaccgatccccagtggcctgaaagctggtc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcacactttggtgacagtggtcatcatggctaccgatccccagtggcctgaaagctggtc 313
Query: 188 cac-agactgtgattctgagcaacctaatgccataccaactgacaatttctcagtacctt 246
||| || ||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 312 cacaag-ctgtgattctgagcaacctgatgccacaccaactgacaatttctcagtacctt 254
Query: 247 gggctttcatttggcctttcatttgtaaagctaagtcgatgtagcacttcagggtccacc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gggctttcatttggcctttcatttgtaaagctaagtcgatgtagcacttcagggtccacc 194
Query: 307 agagctttattcaaatcttgcctgtgctgtgtgctatcctgtgaccaaaagaaaatgact 366
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 193 agagctttattcaaatcttgcctgtgctgtgtgctatcctgtgaccaaaagaagatgact 134
Query: 367 tcatctcagagtctcagtcatcccaattaggaagaagacatggtccctattccttgaggc 426
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcatctcag--tctcagtcatcccaattaggaagaagacatggtccctattccttgaggc 76
Query: 427 cactgagagcatttccatgcagaggattcatgagacactgattactgtgctccccacaga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cactgagagcatttccatgcagaggattcatgagacactgattactgtgctccccacaga 16
Query: 487 gaacaactcttgtta 501
|||||||||||||||
Sbjct: 15 gaacaactcttgtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_a02.g1 MSMg01no385_a02.g1 CHROMAT_FILE:
MSMg01no385_a02.g1 PHD_FILE: MSMg01no385_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:27 2005
(404 letters)
>mm_chr7_81667885_81668687
Length = 803
Score = 719 bits (372), Expect = 0.0
Identities = 381/384 (99%), Gaps = 3/384 (0%)
Strand = Plus / Plus
Query: 1 aaaatttgtcatttatgggaagtggcaaatcacctctgcagggtacccctggctcctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatttgtcatttatgggaagtggcaaatcacctctgcagggtacccctggctcctgct 260
Query: 61 gggtttctgaaaggcaaaggctgcctagccatactgagcggccacataagatgaagcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtttctgaaaggcaaaggctgcctagccatactgagcggccacataagatgaagcatt 320
Query: 121 gtgtggtcccagctgctgtggggcctgtgtgcatacaggcagtgccatgtcactcagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtggtcccagctgctgtggggcctgtgtgcatacaggcagtgccatgtcactcagtgg 380
Query: 181 gggagggaatatgagtgactgcagggtcaaagccattaaagccaatggctatcccaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggagggaatatgagtgactgcagggtcaaagccattaaagccaatggctatcccaaaat 440
Query: 241 caggagcctggtcacggttgtggtagacagtgatacgcagagtggaaaagccaggcaaga 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cag-agcctggtcacggttgtggtagacagtgatacgcagagtggaaaagccaggcaaga 499
Query: 301 aaca-tcactgtatcctgagttctggacaaatgacagcagcaagaaggaaggaaggaagg 359
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaat-actgtatcctgagttctggacaaatgacagcagcaagaaggaaggaaggaagg 558
Query: 360 aaggaaggaaggaaggaaggaagg 383
||||||||||||||||||||||||
Sbjct: 559 aaggaaggaaggaaggaaggaagg 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 113
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 803
Length adjustment: 9
Effective length of query: 395
Effective length of database: 794
Effective search space: 313630
Effective search space used: 313630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
