Query= MSMg01no385_b06.b1 MSMg01no385_b06.b1 CHROMAT_FILE:
MSMg01no385_b06.b1 PHD_FILE: MSMg01no385_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:32 2005
(538 letters)
>mm_chr7_121568423_121569360
Length = 938
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%), Gaps = 1/535 (0%)
Strand = Plus / Plus
Query: 5 gaattctatctaacatattattttctacaagtggtagccttatattatttttctatgtta 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatctaacatactattttctacaagtggtagccttatattatttttctatgtta 264
Query: 65 cttctatgattgttttaaagcttgttttctgaattacaggcaggttagcttatgaggtaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttctatgattgttttaaagcttgttttctgaattacaggcaggttagcttatgaggtaa 324
Query: 125 tgatttgggtatcagggaatgttcaaaggaagactaaatattttaaggtgtatacatact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatttgggtatcagggaatgttcaaaggaagactaaatattttaaggtgtatacatact 384
Query: 185 tcaaattgacaggaattagacaaatgtcagatcccctggaactaaagttatagacaattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaaattgacaggaattagacaaatgtcagatcccctggaactaaagttatagacaattg 444
Query: 245 tgtgctgttgtagtgctgggaattgaaccatagtcctctggaagagttgccagtgctctt 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 tgtgctgttgtagtgctgggaattgaaccatagtcctctggaagagtagccagtgctctt 504
Query: 305 aactgctgaccaatctctccagcccctgacaaaatcttgaggtaacctccaaactataac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactgctgaccaatctctccagcccctgacaaaatcttgaggtaacctccaaactataac 564
Query: 365 tgtctattactttattctccaagtctatgaaagttgaagcatatggaccgtgtttgattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtctattactttattctccaagtctatgaaagttgaagcatatggaccgtgtttgattt 624
Query: 425 ccttctcctcacttctccttgtacttcctgataagctatttctgaccttctcccaacaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccttctcctcacttctccttgtacttcctgataagctatttctgaccttctcccaacaat 684
Query: 485 acagtttaaatgtcatctttcttttacttgtttttt-gagatagagttcatgtag 538
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 685 acagtttaaatgtcatctttcttttacttgtttttttgagatagagttcatgtag 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_b06.g1 MSMg01no385_b06.g1 CHROMAT_FILE:
MSMg01no385_b06.g1 PHD_FILE: MSMg01no385_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:32 2005
(608 letters)
>mm_chr7_121707361_121708368
Length = 1008
Score = 1168 bits (604), Expect = 0.0
Identities = 607/608 (99%)
Strand = Plus / Minus
Query: 1 attccactttgtataggaaaaacagaatcttcatggtgaaacagtgaaactctacccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 attccactttgtataggaaaaacagaatcttcatggtgaaacagtgaaactctacccttc 749
Query: 61 taaacacccctgtggtgataaaagctatagaaaacagtactgatcagagtcttttattcc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 taaacacccctgtggtaataaaagctatagaaaacagtactgatcagagtcttttattcc 689
Query: 121 aagagtaaactctgtgagacagaatgaaaggaagggtgcagtgaacgttgctgagcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aagagtaaactctgtgagacagaatgaaaggaagggtgcagtgaacgttgctgagcacta 629
Query: 181 gcaaaataaatggctcaagaggaggctcagagcttcagttattcattagctcttactctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gcaaaataaatggctcaagaggaggctcagagcttcagttattcattagctcttactctt 569
Query: 241 taaaggtcagtgggggagatgtacattagtgctgtcaatcagataggctgtactgggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 taaaggtcagtgggggagatgtacattagtgctgtcaatcagataggctgtactgggaga 509
Query: 301 gtctgtactccctactaaggtagcagggaaagaagaaataattccttaatcaacacaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtctgtactccctactaaggtagcagggaaagaagaaataattccttaatcaacacaaat 449
Query: 361 tggagagtattcctggaattgaaattaatctgtttttaaaataaacaatggaagggactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tggagagtattcctggaattgaaattaatctgtttttaaaataaacaatggaagggactc 389
Query: 421 cctcctgaatggagtacctgtattgtacagcagctgcagccaaactagatacttcaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cctcctgaatggagtacctgtattgtacagcagctgcagccaaactagatacttcaagcc 329
Query: 481 ttaaaatgatgtgagagaagaaggcggggctgatatcaagtatgtagcaggcaatgaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaaaatgatgtgagagaagaaggcggggctgatatcaagtatgtagcaggcaatgaacg 269
Query: 541 ctcctgctgcttcaccgttactgtttcccaagggcaacctcaatatccatcctgtgaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctcctgctgcttcaccgttactgtttcccaagggcaacctcaatatccatcctgtgaaac 209
Query: 601 tgaaggtt 608
||||||||
Sbjct: 208 tgaaggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
