Query= MSMg01no385_h09.b1 MSMg01no385_h09.b1 CHROMAT_FILE:
MSMg01no385_h09.b1 PHD_FILE: MSMg01no385_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:02 2005
(496 letters)
>mm_chr7_84523221_84524116
Length = 896
Score = 930 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Minus
Query: 16 gaattctggggctgaagatgtcagtctgagtcctgagcaaggctccaacgtccacaagga 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaattctggggctgaagatgtcagtctgagtcctgagcaaggctccaacgtccacaagga 637
Query: 76 aatggataaaattgccctgcaatgtgcaccctgatcaatatttcattatcaatatgttat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aatggataaaattgccctgcaatgtgcaccctgatcaatatttcattatcaatatgttat 577
Query: 136 tgtttgtaggaatttccccttcagactcctggggcaggttagtaaatcttgccgatcagt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgtttgtaggaatttccccttcagactcctggggcaggttagtaaatcttgccgatcagt 517
Query: 196 gaagccttctgaatgaaagcaattttaaaccaatcatctctctcagatttggtgaaatga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaagccttctgaatgaaagcaattttaaaccaatcatctctctcagatttggtgaaatga 457
Query: 256 gcagcaattcatgttctttcttgagttatcatcctgcaaggcagctcttttcgattatta 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcagcaattcatgttctttcttgagttatcatcctgcaaggcagctcttttcgattatta 397
Query: 316 aatatctctacatagaagcctggtatatgaagcattaaatctcatgaccagattcctttt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aatatctctacatagaagcctggtatatgaagcattaaatctcatgaccagattcctttt 337
Query: 376 gaataaaaaattacatataacttacttcatttgggttgttaagatatctagtgatgccat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gaataaaaaattacatataacttacttcatttgggttgttaagatatctagtgatgccat 277
Query: 436 ggcctattttgagttcatctagtcattagctgacctttcaactgatgtgacacactctgt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggcctattttgagttcatctagtcattagctgacctttcaactgatgtgacacactctgt 217
Query: 496 g 496
|
Sbjct: 216 g 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_h09.g1 MSMg01no385_h09.g1 CHROMAT_FILE:
MSMg01no385_h09.g1 PHD_FILE: MSMg01no385_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:02 2005
(447 letters)
>mm_chr7_84323731_84324576
Length = 846
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 1 cccctacataaaggaggccagggttcagaatcacagctttccagaagtgatccatactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccctacataaaggaggccagggttcagaatcacagctttccagaagtgatccatactga 260
Query: 61 attttgtaaggtttgtggcttgacttcaacttaattacataggttgctcaggtactcttc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcgtaaggtttgtggcttgacttcaacttaattacataggttgctcaggtactcttc 320
Query: 121 aaagaaactgctttgtacctaactatgttggttttttttttcccctaacactataatcaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 aaagaaactgctttgtacctaactatgttggtttttttttt-ccctaacactataatcaa 379
Query: 181 agaatttcagctagcagaatgtaagatgcaattcccatgcccttaagagaagcagatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaatttcagctagcagaatgtaagatgcaattcccatgcccttaagagaagcagatctt 439
Query: 241 tgattttaaagtccaaactacagccacagatatatagggataactattggagaattttgc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 tgattttaaagtccaaactacagccacagatatataggtataactattggagaattttgc 499
Query: 301 ctttaaggttttgatttttgatacagtgccttatgtaagccaattgaccttgaatttctg 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cttttaggttttgatttttgatacagtgccttatgtaagccaattgaccttgaatttctg 559
Query: 361 atctactgtcctcaaaactgctaagattatagacatgaattctcatacccagcttagccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atctactgtcctcaaaactgctaagattatagacatgaattctcatacccagcttagccc 619
Query: 421 ttagctgtgtccaaagttactaaagtc 447
|||||||||||||||||||||||||||
Sbjct: 620 ttagctgtgtccaaagttactaaagtc 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|