Query= MSMg01no385_p09.b1 MSMg01no385_p09.b1 CHROMAT_FILE:
MSMg01no385_p09.b1 PHD_FILE: MSMg01no385_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:40 2005
(574 letters)
>mm_chr7_98394593_98395566
Length = 974
Score = 1058 bits (547), Expect = 0.0
Identities = 565/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgcatgactaagtattggttcctcattcctgaaagtggaaggtcatttttatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gaattcatgcatgactaagtattggttcctcattcctgaaagtggaaggtcatttttatt 715
Query: 65 cttgtatacagtgaagcagcaaaggctaacagaccacaagttagttctgtgaactttctt 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 714 cttgtatacagtgaagcagcaaaggctaacagacctcaagttagttctgtgaactttctt 655
Query: 125 gctttacacaagttaaggtcagtgtcctaatttctcaaacccttgccttccaagaagagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gctttacacaagttaaggtcagtgtcctaatttctcaaacccttgccttccaagaagagt 595
Query: 185 tggaaggtcaaagatcaccttcctttggggaaataaggacaaaggtatgccaatttttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggaaggtcaaagatcaccttcctttggggaaataaggacaaaggtatgccaatttttcc 535
Query: 245 attagcttaaaataccatgtggcagaggagtacttgaaacgatcttctcagcactgcagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 attagcttaaaataccatgtggcagaggagtacttgaaacgatcttctcagcactgcagc 475
Query: 305 ctactactccatacatttgctctttgccaactagaatttttattactctgtgaatgaacc 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctactactccatacatttgctgtttgccaactagaatttttattactctgtgaatgaacc 415
Query: 365 acagcctttgtaaattccaggatttggtgaacactgacccatctatctgtaaaatctttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 acagcctttgtaaattccaggatttggtgaacactgacccatctatctgtaaaatctttt 355
Query: 425 c-attttataaacactttcacatagctaatgtgaagccatagcttctgtacttctcaaga 483
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 354 ccattttataaacactttcacatagctaatg-gaagccatagcttctgtacttctcaaga 296
Query: 484 gccaaggacaagatttaaatgtaatcaacctctagaaccatttcaacaaccctgggcgac 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accaaggacaagatttaaatgtaatcaacctctagaaccatttcaacaaccctgggcgac 236
Query: 544 acatatttgtataattcctagactgaattaa 574
||||||||||||||||||||||||||||||
Sbjct: 235 gcatatttgtataattcctagactgaattaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_p09.g1 MSMg01no385_p09.g1 CHROMAT_FILE:
MSMg01no385_p09.g1 PHD_FILE: MSMg01no385_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:40 2005
(575 letters)
>mm_chr7_98273635_98274609
Length = 975
Score = 1067 bits (552), Expect = 0.0
Identities = 567/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 4 ctgaacccaaaggcctgaaatttgaaaatggaggtactcctgaccatctctctggctaaa 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ctgaacccaaaggcctgaaatttgaaaatggaggtactcctgacgatctctctggctaaa 263
Query: 64 gatacaagaacatttccttaacatctacatggtgaagttgggtatactagcttgaataaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatacaagaacatttccttaacatctacatggtgaagttgggtatactagcttgaataaa 323
Query: 124 acaagggagggaacaaggggaacagagatggaaaggaaagagaaaattcaccttctaata 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaagggagggaacaaggagaacagagatggaaaggaaagagaaaattcaccttctaata 383
Query: 184 tttttctctgaatactaaaatgaaccaatttcatgatgtctactaatagtggtgaaggca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttttctctgaatactaaaatgaaccaatttcatgatgtctactaatagtggtgaaggca 443
Query: 244 tagcttcttagtctgcccatccaaatgctaacctctttccaacgaatcctcagaacttct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagcttcttagtctgcccatccaaatgctaacctctttccaacgaatcctcagaacttct 503
Query: 304 acagaagcatgtagaaatagtgttagttgatttgtgaaattaagcatcataaggagaacg 363
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 504 acagaagcatgtagaaatagtgttagttgatttgtgatgttaagcatcataaggagaacg 563
Query: 364 tttatcatttgctcaatgacaattaagggctgttccaaggaaatagggagtgaagaaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttatcatttgctcaatgacaattaagggctgttccaaggaaatagggagtgaagaaaaa 623
Query: 424 agtaagtgaacaagacaagaccaaagtgttaatggtctcccgctgtttctcattctgtca 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 -gtaagtgaacaagacaagaccaaagtgttaatggtctcccgctgtttctcattctgtca 682
Query: 484 ttattttggaagaactttcttgaactatcaaaatagcctttgaataataggatagtttga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttattttggaagaactttcttgaactatcaaaatagcctttgaataataggatagtttga 742
Query: 544 ggcactttgaattggttaaatttaactgggca 575
||||||||||||||||||||||||||||||||
Sbjct: 743 ggcactttgaattggttaaatttaactgggca 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
