Query= MSMg01no386_a03.b1 MSMg01no386_a03.b1 CHROMAT_FILE:
MSMg01no386_a03.b1 PHD_FILE: MSMg01no386_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:44 2005
(597 letters)
>mm_chr7_97063119_97064116
Length = 998
Score = 1017 bits (526), Expect = 0.0
Identities = 570/586 (97%), Gaps = 5/586 (0%)
Strand = Plus / Plus
Query: 15 gaattccaagacagttcacagctacacactgagactttgtctcagggggaaaaacattta 74
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattccaagacag-ccagagctacacactgagactttgtctcagggggaaaaacattta 273
Query: 75 acaaaagaaaaataggtctttaaaacatttgctagccatttttaagtaatgacacaataa 134
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274 acaaaagaaaaataggtctttaaaacatttgctaaccatttttaagtaatgacacaataa 333
Query: 135 aggatattttcagtccgctcatggcttgacacaggtacccactctagacaggtatcatcc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggatattttcagtccgctcatggcttgacacaggtacccactctagacaggtatcatcc 393
Query: 195 atgaacctagaacaagggtgtgttgacttctgctactggtacaaaacaatcaacttcaaa 254
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 394 atgaacctagaacaagggtgtgttaacttctgctactggtacaaaacaatcaacttcaaa 453
Query: 255 aaa---aagattattttggttcagtttttaaggcttcagtatacggtggcttggccctgt 311
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaaaggaagattattttggttcagtttttaaggcttcagtatacggtggcttggccctgt 513
Query: 312 tgctctgaggaccaaagaaagatgtgtcacagaagcacatggtgaaagttagctcacctc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgctctgaggaccaaagaaagatgtgtcacagaagcacatggtgaaagttagctcacctc 573
Query: 372 gtggcagccaagtagcaaagagagacaggaagagacccgtctcccgctcctcgtcaagga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtggcagccaagtagcaaagagagacaggaagagacccgtctcccgctcctcgtcaagga 633
Query: 432 gcccaaaggactccacggccctccacaggctccacttcccacaacactccctgaaggtgc 491
||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||
Sbjct: 634 gcccaaaggactccacggccctccacaggctccacttcccacaacaccccctgcatgtgc 693
Query: 492 tagctcagccggcagactgaagatcctgcaaatactgttctgggttctgactctaattgc 551
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 694 tagctcagccggcagactgaagatcctgcaaatgctgttctgggttcagactctaattgc 753
Query: 552 cattcctctcatcctcattgctataatacctttgagggggtaaaaa 597
||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 754 cattcctctcatcctcattgctataatac-tttgaagaggtaaaaa 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space: 579956
Effective search space used: 579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_a03.g1 MSMg01no386_a03.g1 CHROMAT_FILE:
MSMg01no386_a03.g1 PHD_FILE: MSMg01no386_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:44 2005
(509 letters)
>mm_chr7_97218659_97219566
Length = 908
Score = 901 bits (466), Expect = 0.0
Identities = 499/510 (97%), Gaps = 3/510 (0%)
Strand = Plus / Minus
Query: 1 ttacactctgcgtttgctctcctctcctttgtctcttctgggtctctgcttttgtcgtac 60
||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 708 ttacactctgcgtttcctctcccctcctttgtctcttctgggtctctgctcttgtcgtac 649
Query: 61 aaagcacagctcttttctgctcagcagcatccggaagacaacataagatggcatttactc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aaagaacagctcttttctgctcagcagcatccggaagacaacataagatggcatttactc 589
Query: 121 accatactcaagtaggctgctacagaggtcagctctacaccaggcctgcggcacttcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 588 accatactcaagtaggctgctacagaggtcagctctacaccaggcctgcggcgcttcaat 529
Query: 181 cagcctgagctgagagtaagagctcggggcgtgctgggagctctgttctatagctcatgg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 528 cagcctgagctgagagtaagagctc-gggcgtgctgggagctctgttctatagctcatgg 470
Query: 241 actcctggcctgttattctctcacttgactgctcggctgggtgctcctagctaccccctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 actcctggcctgttattctctcacttgactgctcggctgggtgctcctagctaccccctg 410
Query: 301 gtccttatcgcccttcttttagttttttttattcagcaccaagaactggaggctgacaca 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 409 gtccttatcgcccttcttttagttctttttattcagcaccaagaactggaggctgacaca 350
Query: 361 ggagaagagcctgcagttggtctttggaaactggagagagtgtgggcgagttatatgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggagaagagcctgcagttggtctttggaaactggagagagtgtgggcgagttatatgaaa 290
Query: 421 tgaagcgaagctctggcaggaaactagcttctaatcttgaagct-ttccctggtcctttt 479
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 289 tgaagcgaagctctggcaggaaactagcttctaatcttgaag-tgttccctggtcctttt 231
Query: 480 cttttccctcataatcttatgtttgtgggt 509
||||||| |||||||||||| |||||||||
Sbjct: 230 cttttccttcataatcttatatttgtgggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 908
Length adjustment: 10
Effective length of query: 499
Effective length of database: 898
Effective search space: 448102
Effective search space used: 448102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
