Query= MSMg01no386_l23.b1 MSMg01no386_l23.b1 CHROMAT_FILE:
MSMg01no386_l23.b1 PHD_FILE: MSMg01no386_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:37 2005
(655 letters)
>mm_chr7_149635859_149636913
Length = 1055
Score = 1228 bits (635), Expect = 0.0
Identities = 650/655 (99%)
Strand = Plus / Plus
Query: 1 ttagagtcacatttgtaggcatgaataatctggagagactcttcttcatggtggctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagagtcacatttgtaggcatgaataatctggagagactcttcttcatggtggctaatt 260
Query: 61 aggacaggaagtatataggtaccaggtccatatcaataaagctactaatgtgatagatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggacaggaagtatataggtaccaggtccatatcaataaagctactaatgtgatagatat 320
Query: 121 ctcctttctttgtgattactcatgaggaaaggaataagagctaggaactcttcagaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctttctttgtgattactcatgaggaaaggaataagagctaggaactcttcagaagga 380
Query: 181 gacaaaaaagatctgggacacattccaaaatgtcttcttgtctcacatagctgtcggtaa 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaaaaaagatctggaacacattccaaaatgtcttcttgtctcacatagctgtcggtaa 440
Query: 241 agactccccctctctgtatctctctatccattggagttgtttacatccataggccttaag 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactccccctcactgtatctctctatccattggagttgtttacatccataggccttaag 500
Query: 301 aaataaatgtctaatatttttctacacacaggcctcatctgaatatgagctagaggagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaataaatgtctaatatttttctacacacaggcctcatctgaatatgagctagaggagaa 560
Query: 361 aaggtggcctttatagaaaaataagggtgttgtattgtctaacaatgtattttctttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggtggcctttatagaaaaataagggtgttgtattgtctaacaatgtattttctttata 620
Query: 421 gggaggaggatacttgctttttcaggttgtctgcctccgtttacagatgtgtctgaactc 480
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 gggaggaggatacttgctttttcaggttgtctgcctctgtttacagatgtgtctgaactt 680
Query: 481 tcagtattggtcaatcaagtctatctagggatggtcccagacacttctatctgcttgatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagtattggtcaatcaagtctatctagggatggtcccagacacttctatctgcttgatc 740
Query: 541 ttcctcagtcatggatgctgacaccactcaatcttgagaaggtgcccattcagattcaag 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 ttcctcagtcatggatgctgacaccactcaatcttgagaaggtacccattcagattcaag 800
Query: 601 ttttctatctagtatagtactctaatatatattatattagtatatatgttcatat 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttttctatctagtatagtactctaatatatattatattagtatatatgttcatat 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_l23.g1 MSMg01no386_l23.g1 CHROMAT_FILE:
MSMg01no386_l23.g1 PHD_FILE: MSMg01no386_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:37 2005
(189 letters)
>mm_chr7_149796712_149797302
Length = 591
Score = 356 bits (184), Expect = e-103
Identities = 188/190 (98%), Gaps = 2/190 (1%)
Strand = Plus / Minus
Query: 1 accactcctccctcacagctcctgatgggagccctccagctctgtaacagcaaagaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 accactcctccctcacagctcctgatgggagccctccagctctgtaacagcaaagaaagg 331
Query: 61 ctgggcctgcctgtctgtagggtgggagtgggggttggtccctgcctagcctagggcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgggcctgcctgtctgtagggtgggagtgggggttggtccctgcctagcctagggcata 271
Query: 121 cagaaaagtatcctcttccactgcctggcccctgagaagcaggaaggggaagggggg--t 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 270 cagaaaagtatcctcttccactgcctggcccctgagaagcaggaaggggaaggggggggt 211
Query: 179 gggggtggtc 188
||||||||||
Sbjct: 210 gggggtggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 591
Length adjustment: 8
Effective length of query: 181
Effective length of database: 583
Effective search space: 105523
Effective search space used: 105523
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
