Query= MSMg01no387_b24.b1 MSMg01no387_b24.b1 CHROMAT_FILE:
MSMg01no387_b24.b1 PHD_FILE: MSMg01no387_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:05 2005
(427 letters)
>mm_chr7_108616102_108616926
Length = 825
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%), Gaps = 2/424 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagagatgtaccttcctttgcctccccagtgtgaatatgtttaaggacagaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggaattcagagatgtaccttcctttgcctccccagtgtgaatatgtttaaggacagaaaa 394
Query: 64 cttccctgtgcatattttactgcaatgaaatggtttttcaacttaagaaaattgaaaaca 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cttccctgtgcatattttactgcaatgaaatggtttttcaacttaagaaaattgaaaac- 335
Query: 124 aaaaatgaagaggggctacaaagttgatgagagtaaacgtgagctgcacatgactaagtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaaaatgaagaggggctacaaagttgatgagagtaaacgtgagctgcacatgactaagtg 275
Query: 184 gtgaccactgggtgactggacagtgtgctgtattcttctttatggtattgtgcttaaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtgaccactgggtgactggacagtgtgctgtattcttctttatggtattgtgcttaaagc 215
Query: 244 atttttatttggaggcaggtatagtggtaaatatacttaatcccagcactcaggaagaag 303
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 214 a-ttttatttggaggcaggtatagtggtaaatacacttaatcccagcactcaggaagaag 156
Query: 304 agacataggctggagaacccgtgtaagattgaggccagcctggtctacattgtgagtttc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 155 agacataggctggagaacccgtgtaagattgaggccagcctggtctacattgtgagttcc 96
Query: 364 aggtcagcctggtctacattgtgagttccaggccagccatggctacataatgagatcctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aggtcagcctggtctacattgtgagttccaggccagccatggctacataatgagatcctg 36
Query: 424 tctc 427
||||
Sbjct: 35 tctc 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 825
Length adjustment: 9
Effective length of query: 418
Effective length of database: 816
Effective search space: 341088
Effective search space used: 341088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_b24.g1 MSMg01no387_b24.g1 CHROMAT_FILE:
MSMg01no387_b24.g1 PHD_FILE: MSMg01no387_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:05 2005
(385 letters)
>mm_chr7_108461185_108461969
Length = 785
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctgaccttgaactcagatctgactgtctctaccacccaagtgctg 60
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 201 actctgtagaccaggctgaccttgaactcagatccaactgtctctacctcccaagtgctg 260
Query: 61 ggatcaaaggcgtgtgccaccaccaccccaggattccctttttgagatggtgtattatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatcaaaggcgtgtgccaccaccaccccaggattccctttttgagatggtgtattatgt 320
Query: 121 agcccacactggcttcaaacctgaagatttcttccttcctcagctccagagttctgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcccacactggcttcaaacctgaagatttcttccttcctcagctccagagttctgtgta 380
Query: 181 tgcatgtgcctccacatcagccttaagaagggactcacttaaggacacacatgagttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tgcatgtgcctccacatcagccttaagaagggactcacttaaggacacatatgagttggg 440
Query: 241 acagaattggactaggatggagatctttccattacacggcagtgatcaaacatcttcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaattggactaggatggagatctttccattacacggcagtgatcaaacatcttcatc 500
Query: 301 aatcatttatggaatatctaatatatactctgggaagagctgtctgagagccaatgggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcatttatggaatatctaatatatactctgggaagagctgtctgagagccaatgggag 560
Query: 361 ccaggcacgcagtcagccccaggtt 385
||||||| |||||||||||||||||
Sbjct: 561 ccaggcatgcagtcagccccaggtt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
