XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTC
TGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCAC
CTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAG
GATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTG
ACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTT
GTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATT
TTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATA
AGTTTCAGTGTCTCTGGTTTTATGTGAAGATCCTTGATCCACTTAGATTT
GACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACATG
ATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTC
CACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTG
TGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGT
CTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGC
TTTANGTCTGGCATGCTGATTCCCGCCAGAGTTCTTTTATCTTTGAGAAG
ACTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGACCAATTTGGCAATTG
CTCCCTCCC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGGGAGCCTGGGATACACAGAGCAT
TGAAGGACAACCCATGATATATATTTAAAAAAAAAAACTTAGCTAAAAAG
TTAAAAATCCCTAAATAATCATGATATGCCATGACATCTTGAATATATTT
ACAAACAAACTTGGTATTGTAATTCAAATTTAAATTAAATATAGTATAGG
GACATTTGGTTCCACATTTAAAAGTAAATTACTTAATGTACAATTACCAT
ATCTTAAATAATACAATATATATATTATTTTATAAAACAAGCACAGTGTT
GTAAGAATGCTCACTTTAAATAAATCAATAGAAGATCATCAAAATAGATA
AGTATAATTTAAGAAAGAAACACTACTATATATAATGAAAATTATAAACT
TTCATTTAGGGATATAACATTTATGAGGCTGACACTCAAGCTTAGTGCCC
CTTCTTTTAGCCCTCAAATAATGGCCATTTGATTAGAGGATGAAATCCCT
TTGGCCACATGAAACCTTTTAATGGGTAAGTGTGTGCATAACATTCCTAT
GAATTTAAGCCTTATATACAGGTGAGATTGATTNAAACTTGGGAAGTCAA
CAAAATTTACACAGCTCAAACAATAAATCACAGATCTCAGGAAGTTCTTG
AAACAATGACACATTCTGGTTTTCCTCCTAAGCTTTGNGAGCTCTCCTGA
CAAATATCAAGA

Query= MSMg01no388_a14.g1 MSMg01no388_a14.g1 CHROMAT_FILE:
MSMg01no388_a14.g1 PHD_FILE: MSMg01no388_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:16 2005
         (553 letters)



>mm_chr7_59575552_59576504
          Length = 953

 Score =  915 bits (473), Expect = 0.0
 Identities = 489/495 (98%), Gaps = 2/495 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagggagcctgggatacacagagcattgaaggacaacccatgatatatatttaaaaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cagggagcctgggatacacagagcattgaaggacaacccatgatatatatttaaaaaaaa 434

                                                                       
Query: 61  aaacttagctaaaaagttaaaaatccctaaataatcatgatatgccatgacatcttgaat 120
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaac--agctaaaaagttaaaaatccctaaataatcatgatatgccatgacatcttgaat 376

                                                                       
Query: 121 atatttacaaacaaacttggtattgtaattcaaatttaaattaaatatagtatagggaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atatttacaaacaaacttggtattgtaattcaaatttaaattaaatatagtatagggaca 316

                                                                       
Query: 181 tttggttccacatttaaaagtaaattacttaatgtacaattaccatatcttaaataatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttggttccacatttaaaagtaaattacttaatgtacaattaccatatcttaaataatac 256

                                                                       
Query: 241 aatatatatattattttataaaacaagcacagtgttgtaagaatgctcactttaaataaa 300
           |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 255 aatatacatattattttataaaacaagcacagtgttataagaatgctcactttaaataaa 196

                                                                       
Query: 301 tcaatagaagatcatcaaaatagataagtataatttaagaaagaaacactactatatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tcaatagaagatcatcaaaatagataagtataatttaagaaagaaacactactatatata 136

                                                                       
Query: 361 atgaaaattataaactttcatttagggatataacatttatgaggctgacactcaagctta 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135 atgaaaattataaactttcatttagggatataacattcatgaggctgacactcaagctta 76

                                                                       
Query: 421 gtgccccttcttttagccctcaaataatggccatttgattagaggatgaaatccctttgg 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 75  gtgccccttcttttagccctcaaatcatggccatttgattagaggatgaaatccctttgg 16

                          
Query: 481 ccacatgaaaccttt 495
           |||||||||||||||
Sbjct: 15  ccacatgaaaccttt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)