Query= MSMg01no388_c13.b1 MSMg01no388_c13.b1 CHROMAT_FILE:
MSMg01no388_c13.b1 PHD_FILE: MSMg01no388_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:25 2005
(184 letters)
>mm_chr7_99438590_99439173
Length = 584
Score = 323 bits (167), Expect = 4e-93
Identities = 179/183 (97%)
Strand = Plus / Minus
Query: 2 ctgcttgcttcttttgctcatatgaacagctttgatgacatgaactaaatcccacatagc 61
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 ctgcttgcttcttttgctcatatgaacagctttgatgacatgaacgaaatcccacatagc 325
Query: 62 tactctggggattaaggacatgtactgggaactaataatgtagttgcctagtactctgaa 121
|||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 324 tactctggggattaagaacatttactgggaactaataatgtagttgcctaatactctgaa 265
Query: 122 aattgccatatttgtatccttaacacttcggttcatttccttcattttttgatactatgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aattgccatatttgtatccttaacacttcggttcatttccttcattttttgatactatgt 205
Query: 182 ttg 184
|||
Sbjct: 204 ttg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no388_c13.g1 MSMg01no388_c13.g1 CHROMAT_FILE:
MSMg01no388_c13.g1 PHD_FILE: MSMg01no388_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:25 2005
(565 letters)
>mm_chr7_99243859_99244820
Length = 962
Score = 1033 bits (534), Expect = 0.0
Identities = 553/562 (98%), Gaps = 7/562 (1%)
Strand = Plus / Plus
Query: 6 agaaggagctttgagtatgtgaggatcttctgttatctagaaaaagactggcaagctaga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 agaaggagctttgagtatgtgaggatcttctgttatctagaaaaagactggcaagctaga 265
Query: 66 ttcaccgtgcttccttggagaaacatctgccattctctggcatggaatcctagccatgta 125
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 266 ttcaccgtgcttccttggagaaacatctgccattctctggcatagaatcctagccatgta 325
Query: 126 acacatagtaaatgaaaacaaaacaaaacaactcaataaccataatgggcagtgagaacc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acacatagtaaatgaaaacaaaacaaaacaactcaataaccataatgggcagtgagaacc 385
Query: 186 aaagttaacactgctcttttccagttacactccttaaggacacttattcagtgtgtcttt 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaagttaacactgctcttttccagttacactccttaaggacacttattcagtgtgtc--- 442
Query: 246 att--cacacgtaacacagctccagtgaatagagtccacaaaaaaatagcacagcaatga 303
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attagcacacataacacagctccagtgaatagagtccacaaaaaaatagcacagcaatga 502
Query: 304 acatgacctatgataggtatcccagaggatgcccgctgaaagactcagctgtaaatagcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acatgacctatgataggtatcccagaggatgcccgctgaaagactcagctgtaaatagcc 562
Query: 364 ttctaaagcccaaaattcaattcagggaaactgggaccatttttgtctcaaagtggtatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttctaaagcccaaaattcaattcagggaaactgggaccatttttgtctcaaagtggtatt 622
Query: 424 tctacaatgtgcatgtagatctgtgaaaagactccatgaaaagtgttcatgatacagcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctacaatgtgcatgtagatctgtgaaaagactccatgaaaagtgttcatgatacagcaa 682
Query: 484 tgaatcagaaaaaacccagcagaaataaagagagaccatgaaagtgttttctagtcctgt 543
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 683 tgaatcagaaaaaacccagcagaaata--gagagaccatgaaagtgttttctagtcctgt 740
Query: 544 tgagtttaaggatccctacaca 565
||||||||||||||||||||||
Sbjct: 741 tgagtttaaggatccctacaca 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 962
Length adjustment: 10
Effective length of query: 555
Effective length of database: 952
Effective search space: 528360
Effective search space used: 528360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
