Query= MSMg01no388_i18.b1 MSMg01no388_i18.b1 CHROMAT_FILE:
MSMg01no388_i18.b1 PHD_FILE: MSMg01no388_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:54 2005
(475 letters)
>mm_chr7_111174324_111175198
Length = 875
Score = 795 bits (411), Expect = 0.0
Identities = 453/467 (97%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcccattaactgaatttatctgaaaaatggctcattcaggactctggaatatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaattcttcccattaactgaatttatctgaaaaatggctcattcaggactctggaatatt 611
Query: 65 ccaaatataacaattgagcacttcccatatggagaatataagccttgccttgttagagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ccaaatataacaattgagcacttcccatatggagaatataagccttgccttgttagagta 551
Query: 125 gtaatatggttaattcatcttactctgattgtaatgttattactgtaggataaatggttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtaatatggttaattcatcttactctgattgtaatgttattactgtaggataaatggttt 491
Query: 185 cccatggattttcatatttataagcactgtgcaaattgttaactgactcactctaatacc 244
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 490 cccatggattttcatatatataagctctgtgcaaattgttaactgactcactctaatact 431
Query: 245 a-tgatacatcaccaaataactcatcaacttctgaggaatagagcttttgttgtacacac 303
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 430 act-atacatcaccaaataactcatcaacttctgaggaatagagcttttgctgtacacac 372
Query: 304 cgatcttctctttaatgtcagccagatttctttaggagctactttagcaacttatgtatt 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 371 cgatcttctctttaatgtcagccagatttctttaggagctactttagcaatttatgtatt 312
Query: 364 tgtgaaccccccttttgtcttcagaacctgacctgtctgaggaggactgatggctgtttg 423
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cgtgagccctccttttgtcttcagaacctgacctgtctgaggaggactgatggctgtttg 252
Query: 424 ttcataacactgtttattgtctatgaaaaggtgttcatatgttgttt 470
||||||||||||| |||||||||||||||| || |||| ||||||||
Sbjct: 251 ttcataacactgtctattgtctatgaaaagatgctcatttgttgttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_i18.g1 MSMg01no388_i18.g1 CHROMAT_FILE:
MSMg01no388_i18.g1 PHD_FILE: MSMg01no388_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:54 2005
(524 letters)
>mm_chr7_111011629_111012550
Length = 922
Score = 460 bits (238), Expect = e-134
Identities = 282/298 (94%), Gaps = 8/298 (2%)
Strand = Plus / Plus
Query: 231 agagtatccttttttattctaggcattttca-tatgtctttaaattttcttctcttatat 289
||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 429 agagtatccttttttattctaggcattttcagcatgtctttaaattttcttctcatatat 488
Query: 290 tcctatgagatacagtcatgactaaagaagtagaaagtacaagtatatcttacactctat 349
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 489 tcctatgagatacagtcatgactaaagaagtagaaagtacaagtatatcttagactctat 548
Query: 350 tttt-atatatttaaattttaagatgatatttcattaatttttgaggatttcctacagca 408
|||| |||||||||| |||||||||||||||||||| |||||||||||||||| | ||
Sbjct: 549 tttttatatatttaatttttaagatgatatttcatt---ttttgaggatttcctatatca 605
Query: 409 tattttgatcatattcaaccctctctc-tctataaggccctcccagatctgtttctacct 467
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 606 tattttgatcatattcaaccctctctcctctataaggccctcccagatctgtttctacct 665
Query: 468 cttcactcctcctaaatttaatatcctgttctatattt-attgaatcttttttaataa 524
|||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 666 cttcactcctcctaaatttagtatcctgttctatattgcattgaatcttttt-aataa 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 922
Length adjustment: 10
Effective length of query: 514
Effective length of database: 912
Effective search space: 468768
Effective search space used: 468768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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