Query= MSMg01no389_e10.b1 MSMg01no389_e10.b1 CHROMAT_FILE:
MSMg01no389_e10.b1 PHD_FILE: MSMg01no389_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:49 2005
(242 letters)
>mm_chr7_141358506_141359147
Length = 642
Score = 429 bits (222), Expect = e-125
Identities = 237/242 (97%)
Strand = Plus / Minus
Query: 1 cacaaacaaatcattcctgtgaagcgcatgctcagttccccccaccgtccatattcatgt 60
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 cacaaacaaatcactcctgtgaagcgcatgctcagtttcccccaccgtccatattcatgt 383
Query: 61 tgctatgacatgtttataacaattaatgatgatatatgtgtccacatcctttctcagcct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 tgctatgacatgtttataacaattaatgatgacatatgtgtccacatcctttctcagcct 323
Query: 121 gaaagcgtttattggaatcgtgaggttgaggttatttaagagaacacatgaagtctgata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 322 gaaagcgtttattggaatcgtgaggttgaggttatttaagagaacacatgaagtctgaaa 263
Query: 181 aggatgtggggtccaaaattctttccgctaaagagcttgttttctcaaaagcgattgaca 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 262 aggatgtggggtccaaaattctttctgctaaagagcttgttttctcaaaagcgattgaca 203
Query: 241 aa 242
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_e10.g1 MSMg01no389_e10.g1 CHROMAT_FILE:
MSMg01no389_e10.g1 PHD_FILE: MSMg01no389_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:49 2005
(247 letters)
>mm_chr7_141172016_141172663
Length = 648
Score = 387 bits (200), Expect = e-112
Identities = 236/248 (95%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 1 ttctttatcccctacctccacaatgctaagatcacgagtgtaccatcaccgctggcattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttctttatcccctacctccacaatgctaagatcacgagtgtaccatcaccactggcattc 260
Query: 61 ctgggtagttttaaaatcctggagtttagataggctgccgccacccctatccctgaaaca 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ctgggtagttttaaaatcctggagtttagataggctgcccccacccctatccctgaaaca 320
Query: 121 tcaatgctgaggtgagccccagaacttaagtggagaacgcttcctctgtggggaggagga 180
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tcaatgctgaggtgagacccagaacttaagtggagaaagcttcctctgtggggaggagga 380
Query: 181 tttataaaaaatatcctgagcactgtacatgggcagtcttgggaaccatcagagaggaa- 239
|||||| ||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 381 caaataaaagatatcctgagcactgtacatgcgcagtcttgggaaccatcagaggggagg 440
Query: 240 cagttttg 247
||||||||
Sbjct: 441 cagttttg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
