Query= MSMg01no389_g17.b1 MSMg01no389_g17.b1 CHROMAT_FILE:
MSMg01no389_g17.b1 PHD_FILE: MSMg01no389_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:01 2005
(416 letters)
>mm_chr7_144135754_144136569
Length = 816
Score = 797 bits (412), Expect = 0.0
Identities = 415/416 (99%)
Strand = Plus / Minus
Query: 1 aaatcactagccctccccaacttcctccattcctggtgggaagatctgatgttccctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaatcactagccctccccaacttcctccattcctggtgggaagatctgatgttccctgat 557
Query: 61 gcaaagccactgcatgtcaccctcgtccccagtacatgagccaggagaattagaattacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcaaagccactgcatgtcaccctcgtccccagtacatgagccaggagaattagaattacg 497
Query: 121 tccccttgcccttaaaaactaagttctcaatggctctagagcagaggatactgggggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccccttgcccttaaaaactaagttctcaatggctctagagcagaggatactgggggtag 437
Query: 181 agcctgcaataatttatgacttgggatcctaaatggaagagactgatttctagacatgct 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agcctgcaataatttatgacctgggatcctaaatggaagagactgatttctagacatgct 377
Query: 241 cagtggctatgaccatactaggccttgacaggcccaacctcactctttgagggacagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cagtggctatgaccatactaggccttgacaggcccaacctcactctttgagggacagcca 317
Query: 301 ccaccctgccctaagtccaccctgcttcagaaacacactcactgccaagcgattaaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccaccctgccctaagtccaccctgcttcagaaacacactcactgccaagcgattaaccca 257
Query: 361 aggctccagtcacacagccagggattttatgttctaaattagttacattataccca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggctccagtcacacagccagggattttatgttctaaattagttacattataccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_g17.g1 MSMg01no389_g17.g1 CHROMAT_FILE:
MSMg01no389_g17.g1 PHD_FILE: MSMg01no389_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:01 2005
(447 letters)
>mm_chr7_143957584_143958430
Length = 847
Score = 772 bits (399), Expect = 0.0
Identities = 435/451 (96%), Gaps = 8/451 (1%)
Strand = Plus / Plus
Query: 1 agggcatctgggtgctccagggtgcatatgtaaaattgccttccaaggtgtaagtggcca 60
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggcatctgggtgctcgagagtgcatatgtaaaattgccttccaaggtgtaagtggcca 260
Query: 61 acaaagtccttattttggaagtaggagctcgagagtccaagggaatcttcaatatgccta 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 acaaagtccttattttggaagtaggagctcgagagaccaagggaatcttcaatatgccta 320
Query: 121 acctttaacaccgatatgtttcccgacattgctttccggcaggaagaaacagagctgtgt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 acctttaacaccgatatgtttcccgacactgctttccggcaggaagaaacagagctgtgt 380
Query: 181 tagaaggatttagggtaggctgcagacagtccaagaaccaattcctaagtgatacggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaggatttagggtaggctgcagacagtccaagaaccaattcctaagtgatacggagg 440
Query: 241 gaggcgtgttttata----ggaagtggggtgggaacagagtgagcaagttttatgttttt 296
|||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggcgtg----aaacagaggaagtggggtgggaacagagtgagcaagttttatgttttt 496
Query: 297 aaaacaagaagaaatgggtctctgtcaaagatatttcttgctaataatcatttgctctca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaaacaagaagaaatgggtctctgtcaaagatatttcttgctaataatcatttgctctca 556
Query: 357 gcactgtaaaaattaacactattttcctcctgtgagaggaatgggagaaccgattggcta 416
|||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 557 gcactgtaaaaattaacattattttcctcctgtgagaggaatgagagaaccaattggcta 616
Query: 417 tgactgggggtgctgagtgacacttgtctgg 447
|||||||||||||||||||||||||||||||
Sbjct: 617 tgactgggggtgctgagtgacacttgtctgg 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
