Query= MSMg01no389_l13.b1 MSMg01no389_l13.b1 CHROMAT_FILE:
MSMg01no389_l13.b1 PHD_FILE: MSMg01no389_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:25 2005
(314 letters)
>mm_chr7_69043173_69043886
Length = 714
Score = 522 bits (270), Expect = e-152
Identities = 303/314 (96%)
Strand = Plus / Minus
Query: 1 ccttcttgagttctttatatatattggatattagtcccctatctgatttaggattggcaa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ccttcttcagttctttatatatattggatattagtcccctatctgatttaggattggcaa 653
Query: 61 acagcctttcccagtctctggtggcctttttgtctcattgacagtgtcttttgccttaca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agagcctttcccagtctctggtggcctttttgtctcattgacagtgtcttttgccttaca 593
Query: 121 gaagctttgcaattttatgaggtcccatttgtcaattctcgatcttacagcacaagccac 180
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 592 gaagctttgcaattttatgaggtcccatttgtcaattcttgatcttacagaacaagccat 533
Query: 181 tgctgttctattcagcacatgatatattttgagaaatatttagcataacaaaatatttca 240
|||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 532 tgctgtcctattcagcaaatgatatattttgagaaatgttttgcataacaaaatatttca 473
Query: 241 tgttaacatattttcatgttaatatctatgaatgactacttcattctctcttcaaaacat 300
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 472 agttaacatattttcatgttaatatctatgaatgactacttcagtctctcttcaaaacat 413
Query: 301 atcaatttgttgac 314
||||||||||||||
Sbjct: 412 atcaatttgttgac 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_l13.g1 MSMg01no389_l13.g1 CHROMAT_FILE:
MSMg01no389_l13.g1 PHD_FILE: MSMg01no389_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:25 2005
(308 letters)
>mm_chr7_68970592_68971298
Length = 707
Score = 485 bits (251), Expect = e-141
Identities = 294/309 (95%), Gaps = 3/309 (0%)
Strand = Plus / Plus
Query: 1 tggaaagttataggggcaacatttccaatgtaagcacatacaatttttttttaaaaaaat 60
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 201 tggaaagttataggggcaacatttccaatgtaaacacatacaattttttt--aaaaaaat 258
Query: 61 gaaaatgaatgttatattttagtatagaacaatgagattaattatccaaactttactatt 120
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 259 gaaaatgaatgttatattttagtatagaaccatgagactaattatccaaactttactatt 318
Query: 121 tctattatttttagacctaatccatttctctgttgcttttggtggataccctgaaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 319 tctattatttttagacctaatccatttctctgttgcttttggtggatgccctgaaaatta 378
Query: 181 tttctaattataatgccaataatattgaaaatagtgaactttttctagtctgtgtaagtg 240
||||||||| ||||||||||||| ||||||||||| ||||||||||||||||| || |||
Sbjct: 379 tttctaattctaatgccaataatcttgaaaatagtcaactttttctagtctgtataggtg 438
Query: 241 ccacccttcttaattaacatctacagtatgtttcattttgattcatttttt-cctctaat 299
||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 439 ccacccttcataaataacatctaaagtatgtttcattttgattcatttttttcctctaat 498
Query: 300 ttataattt 308
|||||||||
Sbjct: 499 ttataattt 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 707
Length adjustment: 9
Effective length of query: 299
Effective length of database: 698
Effective search space: 208702
Effective search space used: 208702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
