Query= MSMg01no390_d04.b1 MSMg01no390_d04.b1 CHROMAT_FILE:
MSMg01no390_d04.b1 PHD_FILE: MSMg01no390_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:02 2005
(234 letters)
>mm_chr7_29728355_29728988
Length = 634
Score = 431 bits (223), Expect = e-125
Identities = 233/237 (98%), Gaps = 3/237 (1%)
Strand = Plus / Minus
Query: 1 agatggggctatatgtggtgtctcctttcatgctttgcatagtctgctttctggatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agatggggctatatgtggtgtctcctttcatgctttgcatagtctgctttctggatggaa 328
Query: 61 ctgggcctctgaagtgaatgcaggttccggatacacggatacagttagtatgcctctcct 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 327 ctgggcctctgaagtgaatgcaggttccggatatacggatacagttagtatgcctctcct 268
Query: 121 gtttgccttagaaggaagtgtgaggattaaacaagaaagccatgaaagtttcctgtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtttgccttagaaggaagtgtgaggattaaacaagaaagccatgaaagtttcctgtggct 208
Query: 181 catatcctgtgtgtgtgtgtgtgtg--agtgtgtgtgtgagagaggg-agggaggga 234
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 207 catatcctgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagagaggggagggaggga 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_d04.g1 MSMg01no390_d04.g1 CHROMAT_FILE:
MSMg01no390_d04.g1 PHD_FILE: MSMg01no390_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:02 2005
(220 letters)
>mm_chr7_29556329_29556948
Length = 620
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 1 gcctggtctgtgtagtaagttttaggccagccagagagaccccatcttgaaagaa-gata 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 200 gcctggtctgtgtagtaagttttaggccagccagagagaccccatcttgaaagaaagata 259
Query: 60 aggcctagaggagagccaggtcctctctctaaagcaacctttcccagagtccttacactg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggcctagaggagagccaggtcctctctctaaagcaacctttcccagagtccttacactg 319
Query: 120 gccctgtacttcttcagggcacctcccagtcagagccctactgtatttgaaccaggttgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gccctgtacttcttcagggcacctcccagtcagagccctactgtatttgaaccaggttgt 379
Query: 180 cacccttcccatcccttcccttcccttcccttccctt 216
|||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacccttcccatcccttcccttcccttcccttccctt 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
