CTCNNCANATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTTGAGTGTGACACCTTTGCCACACTCCACTCACCAT
GAGTTCCCTCGTCAGAAGCAGGGTTCTGTCCATAACACCTGTACATCCCT
GAAGAGTGTGGGTTTGGAGGAACTGCTCTGAACTGCAGCCAAAGTGTTTT
GTCCAGCGGGAGTGAAGTCTGTCCCTCCATGATGGAAGACCATTTGTAAG
CAGCTTCTTGCCAGTTAACTAAGCTTTGTGCCTCTGAGTGGAGGTTCACT
TCTGGCCTCCTGTTAATCAGCAGTGATTGGAAAATCCATGTAGCTGAGCC
TCTGGAAAACTTATGGGACCTTCTGTTTATCGGCCCAAGACCAGGGTGGC
CAGAGGAAAAGATAAGGGAACAGGTCACCTGACCTACCTGCTTATTGACC
CGCCTTTTTGAGAGGTTTCTGTTTGATGGCCATCCACATCTTCACGTTCT
TTTTTAACACAGAGATTAAAGTCTGCCCAAAGACTGCTTTCTCAGACCTC
CTAGTCATCTCCAATCATGAGCCCTGGCTGTCCAGCCAAGCCGTTATCTA
CCTACCCTAATTCCATATAGATCCATACTGCCACTGAGAGGATTTCCCGC
CCCTGTATCATTCCAACCCCCTCCTGGGAATGCCCCCGATATTTACCCAA
AATGGCCTGAAAAAGGCCCTCAGGTCCTCCCCCCACCATCTTA

NNNNNNCCCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGAATCTTAAACCAC
ACAAAGACCCAACAAAGAAAGAGAACTTCAGACCAATTTCCTTTATGAAT
GCCGATGTAAAAATACTCAATAAAATTCTCAAAAACTGAATCTAAGAACA
CATCAAAAAAATCATTATGACCATGTAGGCTTTATCCCAGGAATGCAGGG
ATGGTTCAATATATGGAAATCTATCAATGTAATCCATTATATAAACAAAC
TCAAAGGAAAAAAAACCCCACAAGATCATCTCATTATATGCAGAGAAAGC
ATTTGACAAAATTCAACACTCATTCATGGTGGAAGTCTTGGAAAGATCAG
GAATTCATGGCCCATACCTAAATATAATAAGGCAATATACAGCAAACCAG
TAGCCAAACTAAATGGAGATAAACTTGAAGCAATCCCACTAAAATCAGGG
ACTAGACAAGGCTGCCCACTCTCTCCCTATCTATTCAATATAGTACTAAN
AGTCCTAGCCAGAGCAATAGACAACAAAAGGAAGTCCAAGGGACACAGAT
TGGAAAGGAAAAAATCCAAATATCCCTATTTGCGGAAGATAAATTCCCAC
CAGAGAACTCCTAAACCCGAGAAACAACTTCCGCAAAGGAACTGGGAATA
AAATTAATTTAAAAAAACCGAAACCTCCTCCCCTCCAAGGAAAAAAAACT
AAAAAA

Query= MSMg01no390_i24.b1 MSMg01no390_i24.b1 CHROMAT_FILE:
MSMg01no390_i24.b1 PHD_FILE: MSMg01no390_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:31 2005
         (487 letters)



>mm_chr7_117800962_117801842
          Length = 881

 Score =  878 bits (454), Expect = 0.0
 Identities = 476/486 (97%), Gaps = 6/486 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   gaattccttgagtgtgacacctttgccacactccactcaccatgagttccctcgtcagaa 61
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaattccttgagtgtgagacctttgccacactccactcaccatgagttccctcgtcagaa 694

                                                                       
Query: 62  gcagggttctgtccataacacctgtacatccctgaagagtgtgggtttggaggaactgct 121
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 693 gcagggttctgtccataacacctgtacatccctgaaga--gtgggtttggaggaactgct 636

                                                                       
Query: 122 ctgaactgcagccaaagtgttttgtccagcgggagtgaagtctgtccctccatgatggaa 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctgaactgcagccaaagtgttttgtccagcgggagtgaagtctgtccctccatgatggaa 576

                                                                       
Query: 182 gaccatttgtaagcagcttcttgccagttaactaagctttgtgcctctgagtggaggttc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 575 gaccatttgtaagcagcttcttgccagttaactaagctttgtgcctctgagtggatgttc 516

                                                                       
Query: 242 acttctggcctcctgttaatcagcagtgattggaaaatccatgtagctgagcctctggaa 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acttctggcctcctgttaatcagcagtgattggaaaatccatgtagctgagcctctggaa 456

                                                                       
Query: 302 aacttatgggaccttctgtttatcggcccaagaccagggtggccagaggaaaagataagg 361
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 aacttatgggaccttctgtttatcggcccaagaccagggtggccagaggaaaggataagg 396

                                                                       
Query: 362 gaacaggtcacctgacctacctgcttattgacccgcctttttgagaggtttctgtttgat 421
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gaacagatcacctgacctacctgcttattgacccgcctttttgagaggtttctgtttgat 336

                                                                       
Query: 422 ggccatccacatcttcacgttcttttttaacacagagattaaagtctgcccaaagactgc 481
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 335 ggccatccacatcttcacgttcttttttaacacagagatt----tctgcccaaagactgc 280

                 
Query: 482 tttctc 487
           ||||||
Sbjct: 279 tttctc 274


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 881
Length adjustment: 10
Effective length of query: 477
Effective length of database: 871
Effective search space:   415467
Effective search space used:   415467
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)