Query= MSMg01no390_o23.b1 MSMg01no390_o23.b1 CHROMAT_FILE:
MSMg01no390_o23.b1 PHD_FILE: MSMg01no390_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:59 2005
(514 letters)
>mm_chr7_118072295_118073209
Length = 915
Score = 949 bits (491), Expect = 0.0
Identities = 509/515 (98%), Gaps = 1/515 (0%)
Strand = Plus / Plus
Query: 1 ggaaggttttcatgctatgatgtctttgcttttcttaaaatctagcagtgtgtacagggc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ggaaggttttcatgctatgatgtctttgattttcttaaaatctagcagtgtgtacagggc 260
Query: 61 caaatccaagagtaagaacaccattttgggaaagaagataatggtgaaaaaatcctaggt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatccaagagtaagaacaacattttgggaaagaagataatggtgaaaaaatcctaggt 320
Query: 121 tctctttcccattttgaaaaactgcttgataatgtggacttttatttttgagataaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctttcccattttgaaaaactgcttgataatgtggacttttatttttgagataaagtt 380
Query: 181 tcttgtatcccagggtggatttgaacccctcatataaccaaggatgaccttgcacttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttgtatcccagggtggatttgaacccctcatataaccaaggatgaccttgcacttctg 440
Query: 241 atcctcttgcttcctcatgatttctggggttacaggtgtgcccccaccatgcccaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcctcttgcttcctcatgatttctggggttacaggtgtgcccccaccatgcccaggtta 500
Query: 301 ggtgatactgagaatcaaacccaagacctaacacaaacttagcaagaagtactctacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgatactgagaatcaaacccaagacctaacacaaacttagcaagaagtactctacaaa 560
Query: 361 ctaagccatatccccagccctcgttgacagcatcttcatcgataaagtgattcagagaaa 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaagccatatccccagccctctttgacagcatcttcatcgataaagtgattcagagaaa 620
Query: 421 aagaaagaagaa-gtatttctagaaatgcagctatttgatccccacaaagcattgctcgt 479
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaaagaagaaagtgtttctagaaatgcagctatttgatccccacaaagcattgctcgt 680
Query: 480 ctgcctgggctgcatacctgttgactaggtttttg 514
| |||||||||||||||||||||||||||||||||
Sbjct: 681 ccgcctgggctgcatacctgttgactaggtttttg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 915
Length adjustment: 10
Effective length of query: 504
Effective length of database: 905
Effective search space: 456120
Effective search space used: 456120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_o23.g1 MSMg01no390_o23.g1 CHROMAT_FILE:
MSMg01no390_o23.g1 PHD_FILE: MSMg01no390_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:00 2005
(545 letters)
>mm_chr7_118238934_118239878
Length = 945
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Minus
Query: 1 tacatccagatctgcaggcagcaggaagagacacttggcctggcatgggcttttgaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tacatccagatctgcaggcagcaggaagagacacttggcctggcatgggcttttgaaaac 878
Query: 61 ttaaagcccatccacagtgacacacttcctctaacaagggcacacctaatcctttcaaat 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 877 ttaaagcccatccacagtgacacacttcctctaacaaggccacacctaatcctttcaaat 818
Query: 121 agtgtaactacttggtgaccaagtattcaaacctctgagcctctgagggccattctgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 agtgtaactacttggtgaccaagtattcaaacctctgagcctctgagggccattctgatt 758
Query: 181 caaaccacctcatggtcctttgacgttatgtttcaattagtgacaaaattactgaaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 caaaccacctcatggtcctttgacgttatgtttcaattagtgacaaaattactgaaaata 698
Query: 241 tggagtatctgatcatacagcaaacacactacctgaacatggatcagaaccaaagtctga 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tggagtatctgaccatacagcaaacacactacctgaacatggatcagaaccaaagtctga 638
Query: 301 aattcctagcttaggagatatgaaacaaatgactttcaaagagaaggtattgggacaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aattcctagcttaggagatatgaaacaaatgactttcaaagagaaggtattgggacaggg 578
Query: 361 ggcttgtgctggcatctactccatgccttgtacaactttaagggcaagaccctaaacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggcttgtgctggcatctactccatgccttgtacaactttaagggcaagaccctaaacata 518
Query: 421 gatctcatgctttagtttcatcatttgtagactcagataattctaattcccattacaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gatctcatgctttagtttcatcatttgtagactcagataattctaattcccattacaatc 458
Query: 481 tcctctcttgggtactgagctctgattacagggacgtgtagaacttggaaaaacagtgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcctctcttgggtactgagctctgattacagggacgtgtagaacttggaaaaacagtgct 398
Query: 541 gcata 545
|||||
Sbjct: 397 gcata 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
