Query= MSMg01no393_e04.b1 MSMg01no393_e04.b1 CHROMAT_FILE:
MSMg01no393_e04.b1 PHD_FILE: MSMg01no393_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:08 2005
(544 letters)
>mm_chr7_136807624_136808567
Length = 944
Score = 1000 bits (517), Expect = 0.0
Identities = 532/537 (99%)
Strand = Plus / Minus
Query: 8 gaattcaacacaaattccatgcaattaggggttttcactacttgtctctgagaaagaagg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaattcaacacaaattccatgcaattaggggttttcactacttgtctctgagaaagaagg 685
Query: 68 gaatgtctttacccctcagcatggcctggagtcccacatcagcctgagctcgccaagctg 127
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaatgtctttacccctcggcatggcctggagtcccacatcagcctgagctcgccaagctg 625
Query: 128 ctgtggataggcaggggtccctgcagggaggaagcccttctgtttgctcctgttagggtc 187
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgtggacaggcaggggtccctgcagggaggaagcccttctgtttgctcctgttagggtc 565
Query: 188 ttggttaagtccatggccagctaatgacctctcttttttgctttcaggacccttcctccc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttggttaagtccatggccagctaatgacctctcttttttgctttcaggacccttcctccc 505
Query: 248 atcttcctcctttacaggttaaaaaggagtgaattcactttcaggtagggtaatatacct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcttcctcctttacaggttaaaaaggagtgaattcactttcaggtagggtaatatacct 445
Query: 308 gaggctagacagtcactgataagtccatgctttaagtcaccaggaagtcacaaggtccag 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 gaggctagacagtcactgataagtccatgctttaagtcaccaggaagtcacaaggtcccg 385
Query: 368 gaagtcagttccgggatttgttctttttctagagaggggccatctaggtgtgattgtgca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaagtcagttccgggatttgttctttttctagagaggggccatctaggtgtgattgtgca 325
Query: 428 atttttgtctgtgatattgcacaagtccaaagtcctttctaagggcccaggggagccctt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atttttgtctgtgatattgcacaagtccaaagtcctttctaagggcccaggggagccctt 265
Query: 488 atctttctggataatcctcgtgtctgctgctactggctataaggagatactctagcc 544
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 264 atctttctggataatcctcctgtctgctgctactggctataatgagatactctagcc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_e04.g1 MSMg01no393_e04.g1 CHROMAT_FILE:
MSMg01no393_e04.g1 PHD_FILE: MSMg01no393_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:08 2005
(319 letters)
>mm_chr7_136621509_136622227
Length = 719
Score = 549 bits (284), Expect = e-161
Identities = 314/330 (95%), Gaps = 11/330 (3%)
Strand = Plus / Plus
Query: 1 tcagatgcttattgcttcagtgctacacactggttaagaacttcaactctggacatagac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tcagatgcttattgcttcagtgctacacactggttaagaacttcaactctggacataggc 260
Query: 61 agagctgggtttgaatcttaggcctgctcttattctcccaggtaagagatccagctgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagctgggtttgaatcttaggcctgctcttattctcccaggtaagagatccagctgggc 320
Query: 121 tgagcttcagaccccacactgtgagaattagaagccaaaggccatcacttcagagactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagcttcagaccccacactgtgagaattagaagccaaaggccatcacttcagagactcc 380
Query: 181 tggagagaaggaaatgagttgatgctcctggaatacttggtctgcaagaatggcagctcc 240
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 381 tggagagaaggaaatgagttgattctcctggaatagttggtctgcaagaatggcagctcc 440
Query: 241 cattagctattagccccatctttcctgttaacgcacatcacgt-------tg----cttc 289
||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 441 cattagctattagccccatctttcctgttaacgcacatcacgtgaatagctggtttcttc 500
Query: 290 atcctgaggaggtcccgagagagcccatcc 319
|||| |||||||||| ||||||||||||||
Sbjct: 501 atcccgaggaggtcctgagagagcccatcc 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
