Query= MSMg01no394_g08.b1 MSMg01no394_g08.b1 CHROMAT_FILE:
MSMg01no394_g08.b1 PHD_FILE: MSMg01no394_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(388 letters)
>mm_chr7_133298553_133299340
Length = 788
Score = 661 bits (342), Expect = 0.0
Identities = 371/388 (95%), Gaps = 12/388 (3%)
Strand = Plus / Plus
Query: 1 aaaactgactaatggttttaatctgagtatgatacgcagattgttacgcagattgaaaag 60
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 213 aaaactgactaatggttttaatctgagtatga------------tacgcagattgaaaag 260
Query: 61 tagcattctatgaatagccctaaactcaaaaccatagtgtgttcttagttctacaggccg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcgttctatgaatagccctaaactcaaaaccatagtgtgttcttagttctacaggccg 320
Query: 121 tctacaagaatcccaagtcccatgttgagatggtttgtatatgcttggcccaaggagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctacaagaatcccaagtcccatgttgagatggtttgtatatgcttggcccaaggagtgg 380
Query: 181 cactcttaggaggtttggccttgttggagcagggttatcactgtggatgtgggctttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactcttaggaggtttggccttgttggagcagggttatcactgtggatgtgggctttaag 440
Query: 241 acccttgtcctatttgtctagtagtcagtcttcagagctgccttcagaataagaagtggc 300
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 acccttgtcctagctgcctagtagtcagtcttcagagctgccttcagaataagaagtgac 500
Query: 301 tccttcagccccacatctgcctgtacactgccatgctcccatcctgatgataatggactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccttcagccccacatctgcctgtacactgccatgctcccatcctgatgataatggactg 560
Query: 361 aacctctgaacctgtaagccagccccaa 388
||||||||||||||||||||||||||||
Sbjct: 561 aacctctgaacctgtaagccagccccaa 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_g08.g1 MSMg01no394_g08.g1 CHROMAT_FILE:
MSMg01no394_g08.g1 PHD_FILE: MSMg01no394_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(246 letters)
>mm_chr7_133440698_133441343
Length = 646
Score = 395 bits (204), Expect = e-114
Identities = 232/246 (94%), Gaps = 10/246 (4%)
Strand = Plus / Minus
Query: 1 tgcataggacttaagcattctgcacag-aagggaacttccttctaaaattcaatgtgaac 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 540 tgcataggacttaagcattctgcacagaaagggaacttccttctaaaattcaatgtgaac 481
Query: 60 tgtaactttaaaaaaaaatcatatttatttatttatttatttatggggcggggcacatgt 119
||||||||| ||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 480 tgtaacttt--aaaaaaatcatatttatttatttat-------cggggtggggcacatgt 430
Query: 120 gggccacacaggactcagttctctcctaccttgcaggttccagggtcctaaggcttggta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 gggccacacaggactcagttctctcctaccttgcaggttccagggtcctaaggcttggga 370
Query: 180 gtaaggtactcttactatgtgaaccatctcactagcccagttagagctctttatactgga 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 369 gtaaggtactcttactatgtgaaccatctcactagcccaattagagctctttatactgga 310
Query: 240 ttagtc 245
||||||
Sbjct: 309 ttagtc 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
