Query= MSMg01no394_g18.b1 MSMg01no394_g18.b1 CHROMAT_FILE:
MSMg01no394_g18.b1 PHD_FILE: MSMg01no394_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:48 2005
(464 letters)
>mm_chr7_134782448_134783311
Length = 864
Score = 868 bits (449), Expect = 0.0
Identities = 458/461 (99%)
Strand = Plus / Minus
Query: 4 ggaattccctttatgttccaggctagcctccaacttgcagagatccacctgcctttgcct 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ggaattccctttatggaccaggctagcctccaacttgcagagatccacctgcctttgcct 699
Query: 64 cctaagtgctcggtttaaaggctttcatcacgccgtgtagccctagcctataactttgta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cctaagtgctcggtttaaaggctttcatcacgccgtgtagccctagcctataactttgta 639
Query: 124 aatgtccttgccatgtgttacagcaggtctttacacctcagagcttgctgagtatctcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aatgtccttgccatgtgttacagcaggtctttacacctcagagcttgctgagtatctcct 579
Query: 184 ccgtttagttagtgtggctgaaggtttctcagtcacgctgacttcctgtaagagcaactc 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccgtttagttagcgtggctgaaggtttctcagtcacgctgacttcctgtaagagcaactc 519
Query: 244 tgtcttttgttcattctttaatcttcctgtcatcaatttctgccctattgtaattactct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgtcttttgttcattctttaatcttcctgtcatcaatttctgccctattgtaattactct 459
Query: 304 aactttaccttggtttccaaggccctgaggtgtatgtcaccatttatttgactggtctct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aactttaccttggtttccaaggccctgaggtgtatgtcaccatttatttgactggtctct 399
Query: 364 tacatctttaacgtagacaactattgccacaaatacctctcttcttactacgttcgtggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tacatctttaacgtagacaactattgccacaaatacctctcttcttactacgttcgtggt 339
Query: 424 aactcatggagtttgaggctattgtattttcgttttccttt 464
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aactcatggagtttgaggctattgtattttcgttttccttt 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_g18.g1 MSMg01no394_g18.g1 CHROMAT_FILE:
MSMg01no394_g18.g1 PHD_FILE: MSMg01no394_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:48 2005
(465 letters)
>mm_chr7_134592803_134593668
Length = 866
Score = 870 bits (450), Expect = 0.0
Identities = 462/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 tgaaaag-actagatgagaagggagcggtggtaaggatctggtgcacaaaaggcgcgtct 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaagtactagatgagaagggagcggtggtaaggatctggtgcacaaaaggcgcgtct 260
Query: 60 ggtaaaattgaatgactagaatggtaagttgactggtcttgtaccttgggcagctcctaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaaaattgaatgactagaatggtaagttgactggtcttgtaccttgggcagctcctaa 320
Query: 120 gtagtctatagaagtgaatggcctacctgagtaccaaggaagttcgcttgtttagaggtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagtctatagaagtgaatggcctacctgagtaccaaggaagttcgcttgtttagaggtg 380
Query: 180 agactaatagctttgggcttaccctttctttgtacagtggaatgcacatttaggctacca 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaccaatagctttgggcttaccctttctttgtacagtggaatgcacatttaggctacca 440
Query: 240 gggggaacaaaagacaggtggctagttgatcctttcatttataatgaagcagggaaatca 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggggaacaaaagacagatggctagttgatcctttcatttataatgaagcagggaaatca 500
Query: 300 cccctgtaccgttgctttccgaaatagtgcagctgtgtcaacgtgtgtcaggagtgcatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccctgtaccgttgctttccgaaatagtgcagctgtgtcaacgtgtgtcaggagtgcatg 560
Query: 360 ggcaacatagaccctgtttttaaatgaagagtgtatagcccagtggcaggcatttaccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 ggcaacatagaccctgtttttaaatgaagagtgtatagcccagtggcaggcatttgccta 620
Query: 420 gcatgcatggggcccaaagttctataaaagtatttttaaaatagat 465
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcatgcatggggcccaaagttctataaaagtatttttaaaatagat 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space: 389480
Effective search space used: 389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
