Query= MSMg01no394_i21.b1 MSMg01no394_i21.b1 CHROMAT_FILE:
MSMg01no394_i21.b1 PHD_FILE: MSMg01no394_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:58 2005
(490 letters)
>mm_chr7_38588247_38589136
Length = 890
Score = 903 bits (467), Expect = 0.0
Identities = 480/489 (98%), Gaps = 9/489 (1%)
Strand = Plus / Plus
Query: 6 gaattcatttttca-----tccctatatcaaaacggaagagagactgttaggagagagac 60
|||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttttcaagaagt----atatcaaaacggaagagagactgttaggagagagac 260
Query: 61 ccgaaggagctgatgatgagtgaggctgatggggagaagtagctataaccctattaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgaaggagctgatgatgagtgaggctgatggggagaagtagctataaccctattaattt 320
Query: 121 acatgcatgtacaaaaatgtcaccagagaccaccattttgtacaattaatgtgtagtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgcatgtacaaaaatgtcaccagagaccaccattttgtacaattaatgtgtagtgac 380
Query: 181 aaaaattagagaccaatttaggaattccatagaattgtgaaaaaatcaaatatttctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaattagagaccaatttaggaattccatagaattgtgaaaaaatcaaatatttctcag 440
Query: 241 ttttaaaaagacgaagccaaaaagtacattacaagttaacatgaaggaaaaaaaaaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaaaaagacgaagccaaaaagtacattacaagttaacatgaaggaaaaaaaaaacag 500
Query: 301 gatatcagttgagttaagacaatgtgtacaagcaagtgtatagctatgagtgcttgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatatcagttgagttaagacaatgtgtacaagcaagtgtatagctatgagtgcttgtctt 560
Query: 361 ttaaaactgttaactaagaaagagggctagagagatgttaagagtgcttgggttccgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaaactgttaactaagaaagagggctagagagatgttaagagtgcttgggttccgttc 620
Query: 421 atagcatccacctgacagctcactactgttggtaactccagtcccaagggatctgatgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagcatccacctgacagctcactactgttggtaactccagtcccaagggatctgatgcc 680
Query: 481 ctcctctgg 489
|||||||||
Sbjct: 681 ctcctctgg 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_i21.g1 MSMg01no394_i21.g1 CHROMAT_FILE:
MSMg01no394_i21.g1 PHD_FILE: MSMg01no394_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:58 2005
(334 letters)
>mm_chr7_38796941_38797674
Length = 734
Score = 609 bits (315), Expect = e-179
Identities = 330/335 (98%), Gaps = 2/335 (0%)
Strand = Plus / Minus
Query: 1 ttgattttatttcttttgttgttagtttgtgtttgtttgattgggaatggaactcaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttgattttatttcttttgttgttagtttgtgtttgtttgattgggaatggaactcaggat 475
Query: 61 tgtccccatgtaggcaagagctttacaactgcgctccagtcctgtttttaagacatcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgtccccatgtaggcaagagctttacaactgcgctccagtcctgtttttaagacatcatt 415
Query: 121 tctactcatgttctgggcataccctcttaatatgctaccttgcgttgagaccagcagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctactcatgttctgggcataccctcttaatatgctaccttgcgttgagaccagcagtct 355
Query: 181 gttcattattgatttgagtactcttaggaatagaggcagttttactttggatttaggggt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 354 gttcattattgatttgagtactcttaggaattgaggcagttttactttggatttaggggt 295
Query: 241 ttagttcactattatgatttttttt-ccccacttccttgtcatcttggttatgacaggtg 299
||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 294 ttagttcactaggatgatttttttttccccacttc-ttgtcatcttggttatgacaggtg 236
Query: 300 atgggtgtatttgtttctcaaatttgttctgatgg 334
|||||||||||||||||||||||||||||||||||
Sbjct: 235 atgggtgtatttgtttctcaaatttgttctgatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
