Query= MSMg01no394_l22.b1 MSMg01no394_l22.b1 CHROMAT_FILE:
MSMg01no394_l22.b1 PHD_FILE: MSMg01no394_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:14 2005
(457 letters)
>mm_chr7_62428853_62429709
Length = 857
Score = 830 bits (429), Expect = 0.0
Identities = 450/457 (98%)
Strand = Plus / Minus
Query: 1 ctagccttgtacctacagagatacacctgtctgctttctgagaggtgagattaaatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 748 ctagccttgtacctacagagatacacctgtctgctttctgagaggtgggattaaacgcat 689
Query: 61 atgccattgctctcagtcttccacatgatttgaaaataaatactaaataataaataactg 120
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 688 atgccaatgctctcagtcttccacatgatttgaaaataaataataaataataaataactg 629
Query: 121 ctagtgtatatgcaaacaaattgtggcatttatgtgtaaggtcctttcaaaggccttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctagtgtatatgcaaacaaattgtggcatttatgtgtaaggtcctttcaaaggccttgat 569
Query: 181 ttgttttttgtgcaatagagtccatatttcctcttcattgttgtgtgaaggttagacata 240
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 568 ttgttctttgtgcaatagagtccatatttcctcttcattgctgtgtgaaggttagacata 509
Query: 241 actacacactcaaagcattggatgaaacacaaaatgttagtggctcactatgtgatacct 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 508 actacacactcaaagcattggataaaacacaaaatgttagtggctcactatgtgatacct 449
Query: 301 ttgagtgctcaatactttcaactgaacaacactggatgagtctcagatattctctctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttgagtgctcaatactttcaactgaacaacactggatgagtctcagatattctctctgta 389
Query: 361 aacttttccaaccttctttcctttgccacagattcatagaaactagttcttcctcaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacttttccaaccttctttcctttgccacagattcatagaaactagttcttcctcaaagc 329
Query: 421 agccataactctgaccaataaaacaccatcttctgtg 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 328 agccataactctgaccaataaaacaccatcttctgtg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_l22.g1 MSMg01no394_l22.g1 CHROMAT_FILE:
MSMg01no394_l22.g1 PHD_FILE: MSMg01no394_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:14 2005
(476 letters)
>mm_chr7_62236053_62236932
Length = 880
Score = 866 bits (448), Expect = 0.0
Identities = 471/480 (98%), Gaps = 4/480 (0%)
Strand = Plus / Plus
Query: 1 tgcaggaactcccagctcccagtgtccttgctgaaacagctaagaaaaccatctgcaagt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagaaactcccagctcccagtgtccttgctgaaacagctaagaaaaccatctgcaagt 260
Query: 61 agctaggatagatggcaagaatacagtaggtttatttgcagtggatcatttgttttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctaggatagatggcaagaatacagtaggtttatttgcagtggatcatttgttttatgt 320
Query: 121 gcattttctcaacatgtggcttctaatgtaaatgaaagagtcatcacatggagccatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcattttctcaacatgtggcttctaatgtaaatgaaagagtcatcacatggagccatcaa 380
Query: 181 gcagggatggttatggagtatttgagactgatgccaaggatcaagtcagccatactcata 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagggatggctatggagtatttgagactgatgccaaggatcaagtcagccatactcata 440
Query: 241 ggcaacaggacataggccactcaccaaggaaagcatggggtctttagaattctgaagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcaacaggacataggccactcaccaaggaaagcatggggtctttagaattctgaagata 500
Query: 301 actttttaaatttatcttttagttttgttggcatcccttaaattatgtacttttagtacc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttttaaatttattttttagttttgttggcatcccttaaattatgtacttttagtacc 560
Query: 361 tagggtcttactagaaacaaaaaggaagcagcaaaagtagcagagtcattagtggcaaag 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 tagggtcttactagaaacaaaaaggaagcagcagaagtagcagagtcattagtggcaaag 620
Query: 421 aattctgaggggg---gagcatgttaaa-gcagttggaagggataagcatgattaattag 476
||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aattctgggggggagggagcatgttaaaagcagttggaagggataagcatgattaattag 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 880
Length adjustment: 10
Effective length of query: 466
Effective length of database: 870
Effective search space: 405420
Effective search space used: 405420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
