Query= MSMg01no395_d13.b1 MSMg01no395_d13.b1 CHROMAT_FILE:
MSMg01no395_d13.b1 PHD_FILE: MSMg01no395_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:59 2005
(314 letters)
>mm_chr7_36916380_36917096
Length = 717
Score = 567 bits (293), Expect = e-166
Identities = 309/315 (98%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 1 ctacggggactgcacttattcacaggtctgtgctctgcttgctctgagagtctgactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctacggggactgcacttattcacaggtctgtgctctgcttgctctgagagtctgactttt 456
Query: 61 aagctccccacggatgtccctgcaaacgacagacccagaaccccacactgtgtgagcatc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagctccccgcggatgtccctgcaaacgacagacccagaaccccacactgtgtgagcatc 396
Query: 121 acagagaacaacccagctccttcgagtgcttgacgccgtgagagtcaatgtcggctttgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 395 acagagaacaacccagctccttcgagtgcttgacgccgtgagagtcaatgtcagctttgt 336
Query: 181 atggcatcttctcaagactccctctatgtggcttaatgtggtcatcagtattagctcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atggcatcttctcaagactccctctatgtggcttaatgtggtcatcagtattagctcctt 276
Query: 241 aatctagatgccatcgtgtcttcccatttccatagtgtcttagtttgggggtttttttt- 299
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 275 aatctagatgccatcgtgtcttcccatttccatagtgtcttagtttggggtttttttttt 216
Query: 300 gtt--tgtttgtttg 312
||| ||||||||||
Sbjct: 215 gttgttgtttgtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 717
Length adjustment: 9
Effective length of query: 305
Effective length of database: 708
Effective search space: 215940
Effective search space used: 215940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_d13.g1 MSMg01no395_d13.g1 CHROMAT_FILE:
MSMg01no395_d13.g1 PHD_FILE: MSMg01no395_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:59 2005
(527 letters)
>mm_chr7_36729583_36730509
Length = 927
Score = 942 bits (487), Expect = 0.0
Identities = 517/527 (98%)
Strand = Plus / Plus
Query: 1 catggttgaactggtgaagaggaagggaaagatgtcgtctgtaggaaaatggagacacag 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 catggttgaactggtgaagaggaagggaaagatgtcgtctgcaggaaaatggagacacag 260
Query: 61 gagatcatgttaagtgaaacatgccaccctcagaaggagcattttatgtgcatgtccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatcatgttaagtgaaacatgccaccctcagaaggagcattttatgtgcatgtccttt 320
Query: 121 tgcatgtggatttaaaaataaaccagaaggggggtgacttagggaaaggaagaggccagt 180
||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 321 tgcatgtggatttaaaaataaaccagaaggggggtgacttaggaaaaggatggggccaga 380
Query: 181 ggtggcaataagaatgggtgacatgggagtaaaagtccatgttacatgtcacggtgcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ggtggcaataagaatgggtgacatgggagtaaaagtccatgttacatgtcatggtgcagg 440
Query: 241 ccatttgtctgtacaatgaatacacgtgagaacaataaagcctacttctgaagagaaaca 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacaagactgtacaatgaatacacgtgagaacaataaagcctacttctgaagagaaaca 500
Query: 301 tgtctgtttacatcctagtatgtgctgcaagcagtccggatgcacagccttgaccttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtctgtttacatcctagtatgtgctgcaagcagtccggatgcacagccttgaccttggc 560
Query: 361 ctgtgggacttggctgttcagatatgtggacttcctggctcctttaccttactctcagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgggacttggctgttcagatatgtggacttcctggctcctttaccttactctcagat 620
Query: 421 ctctctgcacggctggtagaccagatgctccttgtggtgagaagctgtgcactctggtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctctgcacggctggtagaccagatgctccttgtggtgagaagctgtgcactctggtct 680
Query: 481 cctgacttcttctgttttagttagggttttactgctgtgaacagaca 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctgacttcttctgttttagttagggttttactgctgtgaacagaca 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
