Query= MSMg01no395_h20.b1 MSMg01no395_h20.b1 CHROMAT_FILE:
MSMg01no395_h20.b1 PHD_FILE: MSMg01no395_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:21 2005
(552 letters)
>mm_chr7_149885758_149886709
Length = 952
Score = 971 bits (502), Expect = 0.0
Identities = 537/549 (97%)
Strand = Plus / Plus
Query: 4 ggaattctgttgagttccgcttgtcctagtcttaccagggggtccacatgactccaagtt 63
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttgagttaagcctgtcctagtcttaccagggggtccacatgactccaagtt 263
Query: 64 tgtactccccaattaaccagaaataaccatgggatgtctctgtggactcaacaggggtgt 123
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 264 tgtactccccaattaaccagaaataaccgtgggatgtctctgtggactcagcaggggtgt 323
Query: 124 acaaaccacatcaggttctccccattcattggatggaataccctgaagccagaatccaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaaaccacatcaggttctccccattcattggatggaataccctgaagccagaatccaga 383
Query: 184 aaccaggcaggaaatggtcacaaaatgctaactataaaagggcatctatgacttaccaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaccaggcaggaaatggtcacaaaatgctaactataaaagggcatctatgacttaccaaa 443
Query: 244 aaggaggactccataaaaaagaaaaaacctgcttgctgacttcctctaagtgtagccctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaggaggactccataaaaaagaaaaaacctgcttgctgacttcctctaagtgtagccctt 503
Query: 304 cagctcaagggtaccaccagactcaactgctgtcttccaagaatgacacagagacttatt 363
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 504 cagctcaagggtaccaccagactcaactgctgtcttctgagaatgacacagagacttatt 563
Query: 364 atttattaagcttgggccttagcttaggcttgtccccaactggcttgtataactaaacct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttattaagcttgggccttagcttaggcttgtccccaactggcttgtataactaaacct 623
Query: 424 atttatctaagttctgccatgtatcccattatctctccttcagtcctggcacctgctcct 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtttatctaagttctgccatgtatcccattatctctccttcagtcctggcacctgctcct 683
Query: 484 tcctctgtgtctgactagtgaatccctccacctggttgtttcctggngttccatctttcc 543
|||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct: 684 tcctctgtgtctgactagtgaatccctccacctgattctttcctgatgttccatctttcc 743
Query: 544 tctcctgct 552
|||||||||
Sbjct: 744 tctcctgct 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_h20.g1 MSMg01no395_h20.g1 CHROMAT_FILE:
MSMg01no395_h20.g1 PHD_FILE: MSMg01no395_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:21 2005
(489 letters)
>mm_chr7_150092538_150093425
Length = 888
Score = 750 bits (388), Expect = 0.0
Identities = 406/412 (98%), Gaps = 1/412 (0%)
Strand = Plus / Minus
Query: 1 cagagtggtgatgtggggctatcctgaggtacagcttcctaaaagggggttcagctccaa 60
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 411 cagagtggtgatgtggggccatcctgaggtacagcttcctaaaa-ggggttcagctccaa 353
Query: 61 gggcagcaggtgttagagagaaagccaaggttcagggacagaacatgggaagagactttc 120
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 352 gggcagcaggtgttagagagaaatcccaggttcagggacagaacatgggaagagactttc 293
Query: 121 cagtcccaggaggctcccacattcaaactgactattcctagggtagctggcacaagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cagtcccaggaggctcccacattcaaactgactattcctagggtagctggcacaagagac 233
Query: 181 tgtgtagagagatagtctgatactaacttctttcttgggcattgtgctattgctgtgaag 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tatgtagagagatagtctgatactaacttctttcttgggcattgtgctattgctgtgaag 173
Query: 241 agataccatgtccaaggcaactcttataaaaacaagtgtttaactgggggctggtttaca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agataccatgaccaaggcaactcttataaaaacaagtgtttaactgggggctggtttaca 113
Query: 301 gtttcagaggctcagtccagtatcatcatggcagggagcatagcagcatgcaggcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gtttcagaggctcagtccagtatcatcatggcagggagcatagcagcatgcaggcacacc 53
Query: 361 ctggagcagaagctaagagctacatcctgatctgtaggcagaaagagagaca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 ctggagcagaagctaagagctacatcctgatctgtaggcagaaagagagaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space: 420562
Effective search space used: 420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
