Query= MSMg01no396_g16.b1 MSMg01no396_g16.b1 CHROMAT_FILE:
MSMg01no396_g16.b1 PHD_FILE: MSMg01no396_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:32 2005
(462 letters)
>mm_chr7_134886480_134887342
Length = 863
Score = 770 bits (398), Expect = 0.0
Identities = 443/464 (95%), Gaps = 11/464 (2%)
Strand = Plus / Minus
Query: 5 aaaccctatctggggaaaaaacaaaaacaaaacaaaacctaaaaacatc------ccacc 58
||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 663 aaaccctatctcgggaaaaaacaaaaacaaaacaaaaccaaaaaacatcccaccaccacc 604
Query: 59 accaccaccaacaacaacaacaaaagaagatgggcttgagagagtgaacacacaaagaaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 accaccaccaacaacaacaacaaaagaagatgggcttgagagagtgaacacacaaagaaa 544
Query: 119 gatttttagtttgtattctacctcaagcagtgactgtgtctttttcccattgattggggc 178
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 543 gatttttagtttgtattctacctcaggcagtgactgtgtctttttcccattggttggggc 484
Query: 179 ctggcctcacaatcttattcagctggctagtctgaaaagaattggtgcaccggaaatgga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctggcctcacaatcttattcagctggctagtctgaaaagaattggtgcaccggaaatgga 424
Query: 239 ggaggatagtgcttagcagtcactgtcccaggccatcaaatccctagaatagagtagtgg 298
||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggagg-----gcaaagcagtcactgtcccaggccatcaaatccctagaatagagtagtgg 369
Query: 299 gcctctgtgtagacaaaggtttgacagggtgggaaggaatgaaacatttgcataaaagtc 358
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcctctgtgcagacaaaggtttgacagggtgggaaggaatgaaacatttgcataaaagtc 309
Query: 359 tgacaaaaaggaagaaatgtaaaagattttaagtccttctccagaacacacatttttatc 418
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 308 tgacaaaaaggaagaaatgtaaaagattttaagtccttctccaggacacacatttttatc 249
Query: 419 gtgtttgatacagaaaggaaaactcacagctgatatttttttac 462
|||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 248 gtgtgtgatacagaaaggaaaactcacagttgatatttttttac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space: 385556
Effective search space used: 385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_g16.g1 MSMg01no396_g16.g1 CHROMAT_FILE:
MSMg01no396_g16.g1 PHD_FILE: MSMg01no396_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:32 2005
(272 letters)
>mm_chr7_134675450_134676121
Length = 672
Score = 495 bits (256), Expect = e-144
Identities = 268/272 (98%)
Strand = Plus / Plus
Query: 1 aaggagtggttttctaaccctctaactggcatgattgaaggaagccaagaatataatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggagtggttttctaaccctctaactggcatgattgaaggaagccaagaatataatgaa 260
Query: 61 ggtctagtcaaacgcctccacaaggtaggacctgtatacagtacagtaaagttaaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtctagtcaaacgcctccacaaggtaggacctgtatacagtacagtaaagttaaaggca 320
Query: 121 atgcctagtaaagctttagagggagaagtcaatgttaggctaaactaagttgtcaagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcctagtaaagctttagagggagaagtcaatgttaggctaaactaagttgtcaagctg 380
Query: 181 tagtgttgaagagagtaaccaatgtcaggctgagcagcttgccttagttattctttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtgttgaagagagtaaccaatgtcaggctgagcagcttgccttagttattctttgttt 440
Query: 241 tctgtttttgttgaggttttccccttattttt 272
||||| ||| ||||||||||||||||||||
Sbjct: 441 tctgtagttggggaggttttccccttattttt 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
