Query= MSMg01no397_b01.b1 MSMg01no397_b01.b1 CHROMAT_FILE:
MSMg01no397_b01.b1 PHD_FILE: MSMg01no397_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:22 2005
(299 letters)
>mm_chr7_52122691_52123390
Length = 700
Score = 518 bits (268), Expect = e-151
Identities = 289/300 (96%), Gaps = 8/300 (2%)
Strand = Plus / Plus
Query: 8 gaattcctaggttattccaggttaggcgtttccgcacatcctggagaggtcaccctcagg 67
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 208 gaattcctaggtcattccaggttaggcgtttccgcacatcctggaggggtcaccctcagg 267
Query: 68 tccagactcaagtccctgggcacacacttccggtcctgacgccttccccagcaggccaga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tccagactcaagtccctgggcacacacttccggtcctgacgccttccccagcaggccaga 327
Query: 128 cctcaaagcttgaccttcagatcaatctgtcagaaaactgtgggcagcatcacccctaag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cctcaaagcttgaccttcagatcaatctgtcagaaaactgtgggcagcatcacccctaag 387
Query: 188 aggagcctcccacaaaggatagccttcactgaggaccgcaatgtggcagcaaccagaaac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aggagcctcccacaaaggatagccttcactgaggaccgcaatgtggcagcaaccagaaac 447
Query: 248 caagtaaaaagaacaccctggaggacaat-gggggg-------ggggggaatcctaagga 299
|||||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 448 caagtaaatagaacaccctggaggacaattggggggcgggggaggggggaatcctaagga 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 700
Length adjustment: 9
Effective length of query: 290
Effective length of database: 691
Effective search space: 200390
Effective search space used: 200390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_b01.g1 MSMg01no397_b01.g1 CHROMAT_FILE:
MSMg01no397_b01.g1 PHD_FILE: MSMg01no397_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:22 2005
(368 letters)
>mm_chr7_52306616_52307384
Length = 769
Score = 698 bits (361), Expect = 0.0
Identities = 367/369 (99%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 1 tgtcaggacttgtacctgggactttccctgtgtcctgtcccctccccaccttctcccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgtcaggacttgtacctgggactttccctgtgtcctgtcccctccccaccttctcccctt 510
Query: 61 gccatttgggacacaagctacctcctgctcctggcctggctggattcctttcctaattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gccatttgggacacaagctacctcctgctcctggcctggctggattcctttcctaattca 450
Query: 121 gggtccgtgtcgtttcagcgggtcttgggttgtccgtgcgtccttgcagtgttggacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gggtccgtgtcgtttcagcgggtcttgggttgtccgtgcgtccttgcagtgttggacctt 390
Query: 181 tcgttctgttgtggcatgggaggacttcaa-ggaggaccacacctttcacgttgactatt 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 389 tcgttctgttgtggcatgggaggacttcaagggaggaccacacctttcacgttgactatt 330
Query: 240 tgcttcccctgacattctccgtccccagtgtgtcctcgcatgcccgtgtttgcaaacgtg 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgcttcccctgactttctccgtccccagtgtgtcctcgcatgcccgtgtttgcaaacgtg 270
Query: 300 ggactcttaagtgctccagaatgacattttttaaccccctcccccgccatgggatgactg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggactcttaagtgctccagaatgacattttttaaccccctcccccgccatgggatgactg 210
Query: 360 gattcccta 368
|||||||||
Sbjct: 209 gattcccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
