Query= MSMg01no397_n14.b1 MSMg01no397_n14.b1 CHROMAT_FILE:
MSMg01no397_n14.b1 PHD_FILE: MSMg01no397_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:24 2005
(245 letters)
>mm_chr7_123741819_123742463
Length = 645
Score = 416 bits (215), Expect = e-121
Identities = 236/247 (95%), Gaps = 8/247 (3%)
Strand = Plus / Minus
Query: 1 gttccaggaaacaagaaaccacctagccatagccacaaccttcttactaacagatactcc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 gttccaggaaacaagaaaccacctagccatagccacaaccttcttaataacagatactcc 384
Query: 61 acccttagtgacagccaactggctcataggaggaaaatgcctaatgttccagatgtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acccttagtgacagccaactggctcataggaggaaaatgcctaatgttccagatgtctca 324
Query: 121 agttagccacaattttacataacaagttcaaatcatttctagccaataagaatgtg---- 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agttagccacaattttacataacaagttcaaatcatttctagccaataagaatgtgccaa 264
Query: 177 ttttgctggacaacttacagaactggaagtcacgtgtagttctctttccttttgcagcca 236
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 263 ----gctgggcaacttacagaactggaagtcgcgtgtagttctctttccttttgcagcca 208
Query: 237 tcagtgg 243
|||||||
Sbjct: 207 tcagtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no397_n14.g1 MSMg01no397_n14.g1 CHROMAT_FILE:
MSMg01no397_n14.g1 PHD_FILE: MSMg01no397_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:25 2005
(248 letters)
>mm_chr7_123535155_123535801
Length = 647
Score = 437 bits (226), Expect = e-127
Identities = 241/246 (97%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 tagtgtatattttggatctacagcatgaaccaatctaatctagatgagccacattttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtgtatattttggatctacagcatgaaccaatctaatctagatgagccacattttaag 260
Query: 61 ggctccacagcttctattaactgttaaggcagtgaagacctaaataaagaaagtcacatc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctccacagcctctattaactgttaaggcagtgaagacctaaataaagaaagtcacatc 320
Query: 121 aatattacagattccttcaaataaggcagcagtcagcagtacctagcaagcagggtctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatattacagattccttcaaataaggcagcagtcagcagtacctagcaagcagggtctta 380
Query: 181 tttcaaatgataaagaaaaaagaattactactttagatatttgtatagtaaattttccaa 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaaatgataaagaaaaa-gaattactactttagatatttgtatagtaaattttccaa 439
Query: 241 tgaaga 246
||||||
Sbjct: 440 tgaaga 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
