Query= MSMg01no398_d23.b1 MSMg01no398_d23.b1 CHROMAT_FILE:
MSMg01no398_d23.b1 PHD_FILE: MSMg01no398_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:55 2005
(579 letters)
>mm_chr7_114788669_114789647
Length = 979
Score = 1096 bits (567), Expect = 0.0
Identities = 573/575 (99%)
Strand = Plus / Minus
Query: 5 gaattcaccgtttctctccacagccagccatcttctaaatgttggtactacccttgggat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gaattcaccgtttctctccacagccagccatcttctaaatgttggtactacccttgggat 720
Query: 65 aaattgagaacagtttacctcagcagagtgaagtctacagccagaggctaagttcaattt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaattgagaacagtttacctcagcagagtgaagtctacagccagaggctaagttcaatta 660
Query: 125 gtgtttgagggaggggtatgcataacggacaatgtttatgatcctaatcacggcttcaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gtgtttgagggaggggtatgcataacggacaatgtttatgatcctaatcacggcttcaag 600
Query: 185 tcaagtcaacttcttaagttagtaatacagcagaactaatgttgtcatctccatctgtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tcaagtcaacttcttaagttagtaatacagcagaactaatgttgtcatctccatctgtat 540
Query: 245 gaactgttcactccacctgaccccatgtctactttctagttcctgacgcctgtcaatatg 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 539 gaactgttcactccacctgaccccatgtctacattctagttcctgacgcctgtcaatatg 480
Query: 305 tcacctcacatggatcaaggactttacaggtgcagttgaggcaacccagaggatgcatag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcacctcacatggatcaaggactttacaggtgcagttgaggcaacccagaggatgcatag 420
Query: 365 agagttgagattagccattccttggtgtaaagaaggagaaagggccatgcactaaggaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agagttgagattagccattccttggtgtaaagaaggagaaagggccatgcactaaggaac 360
Query: 425 accacagaactctgacagccactgggcagacatatgaaacaggttacacagagaaaaact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 accacagaactctgacagccactgggcagacatatgaaacaggttacacagagaaaaact 300
Query: 485 cctaagatacccgtagatacaaaagttcatgtgacttccaaagccagggaactgaaggga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cctaagatacccgtagatacaaaagttcatgtgacttccaaagccagggaactgaaggga 240
Query: 545 aactttgaaactcagaacctctgtagtaaaagcaa 579
|||||||||||||||||||||||||||||||||||
Sbjct: 239 aactttgaaactcagaacctctgtagtaaaagcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_d23.g1 MSMg01no398_d23.g1 CHROMAT_FILE:
MSMg01no398_d23.g1 PHD_FILE: MSMg01no398_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:55 2005
(444 letters)
>mm_chr7_114608677_114609519
Length = 843
Score = 812 bits (420), Expect = 0.0
Identities = 438/444 (98%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 1 cagactgcccattcccacccagagccttaccctgtcattattgattttacggggcaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagactgcccattcccacccagagccttaccctgtcattattgattttacggggcaagca 260
Query: 61 tttccttttgtaaacagcagccatcttcttcaataagatgatgtaatgggattaacgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccttttgtaaacagcagccatcttcttcaataagatgatgtaatgggattaacgatg 320
Query: 121 cactttccagaatcctcatcgattgggaagatggaagtagaaacttgagctggagctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactttccagaatcctcatcgattgggaagatggaagtagaaacttgagctggagctagg 380
Query: 181 ctgtgttttctcaacattttgctgcggctctagtaagcagaatattctcaagtagtgggc 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctgtgttttctcaacattttgctgcggctctagtaagaagaatattctcaagtagtgggc 440
Query: 241 tcacttgttacacaggctagtgtgtttataccaaggggtgggagggttctgtctgtaact 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacttgaaacacaggctagtgtgtttataccaaggggtgggagggttctgtctgtaact 500
Query: 301 gtcactaggagtgtgactgtcatgcatcaaaggaaggagagtagaaggacaaaatagcca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gtcactaggagtgtgactgtcatgcatcaaaggaaggagagtagaaggacaaaatagc-a 559
Query: 361 gtaagtgaccaacaactgaactccagaacctgtgagtgggtgagctggcagagactttgt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaagtgaccaacaactgcactccagaacctgtgagtgggtgagctggcagagactttgt 619
Query: 421 tttctaggacataaatctttctgt 444
||||||||| ||||||||||||||
Sbjct: 620 tttctaggaaataaatctttctgt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 843
Length adjustment: 10
Effective length of query: 434
Effective length of database: 833
Effective search space: 361522
Effective search space used: 361522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
