Query= MSMg01no399_b15.b1 MSMg01no399_b15.b1 CHROMAT_FILE:
MSMg01no399_b15.b1 PHD_FILE: MSMg01no399_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:01 2005
(629 letters)
>mm_chr7_136963252_136964286
Length = 1035
Score = 1143 bits (591), Expect = 0.0
Identities = 622/635 (97%), Gaps = 6/635 (0%)
Strand = Plus / Minus
Query: 1 ctctctgccctgccaacaccaggaggtatcctgcctgcctccccaggctggttctccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ctctctgccctgccaacaccaggaggtatcctgcctgcctccccaggctggttctccatt 776
Query: 61 tgtccagttagggtatcctggctccagcaggcctgtccaatttgaactaagtgttgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tgtccagttagggtatcctggctccagcaggcctgtccaatttgaactaagtgttgaaag 716
Query: 121 tcatactgctgagcagacaatggatgactggaccacaca----cttccttccctgccgta 176
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 715 tcatactgctgagcagacaatggatgactggaccacacacttccttccttccctgccgta 656
Query: 177 cttccttccccagctcacacctctactggtccatcttcacaccccagagcactgtcaagg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttccttccccagctcacacctctactggtccatcttcacaccccagagcactgtcaagg 596
Query: 237 ttgctctgcgggagggtctttaaaaatagcatttctatgatgaaacaatgtcccttgttt 296
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttgctctgcgggagggtccttaaaaatagcatttctatgatgaaacaatgtcccttgttt 536
Query: 297 ggaaataggcagagcttataaaatatgttcctgtgttttcctggatcaggcaacaccgcg 356
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |
Sbjct: 535 ggaaataggcagagcttataaaatatgttcctgtgttttcctggatcagggaacattgtg 476
Query: 357 gagtctggggacttatttacaatgaagaaattgtttttttgcaagtagtgaaagggaagg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagtctggggacttatttacaatgaagaaattgtttttttgcaagtagtgaaagggaagg 416
Query: 417 cttgctttcagagggctgagtaaaggagctattgtttttctgtaattgtgaacacaagct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cttgctttcagagggctgagtaaaggagctattgtttttctgtaattgtgaacacaagct 356
Query: 477 gggaaagggtgatttttacagagaagaaaggcttagggaacgtgactgtccacttctttg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gggaaagggtgatttttacagagaagaaaggcttagggaacgtgactgtccacttctttg 296
Query: 537 agacggactagctagg--aaaaaaacagtggaccctgtgttgttctcccctccccatctt 594
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 295 agacggactagctaggaaaaaaaaacagcggaccctgtgttgttctcccctccccatctt 236
Query: 595 tcccaaccttgtctcatcttttctgttccagccct 629
|||||||||||| ||||||||||||||||||||||
Sbjct: 235 tcccaaccttgtttcatcttttctgttccagccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1035
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1025
Effective search space: 634475
Effective search space used: 634475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_b15.g1 MSMg01no399_b15.g1 CHROMAT_FILE:
MSMg01no399_b15.g1 PHD_FILE: MSMg01no399_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:02 2005
(467 letters)
>mm_chr7_136805325_136806191
Length = 867
Score = 810 bits (419), Expect = 0.0
Identities = 455/467 (97%)
Strand = Plus / Plus
Query: 1 ctgggatttggccacaaggccacagctaacagatttgggcaggaattttgtctgtctcct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggatttggccacaaggccacggctaacagatttgggcaggaattttgtctgtctcct 260
Query: 61 tctctgtttttagaagaaataagcccctgtctaagcagaattgagcctaatattatctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctgtttttagaagaaataagcccctgtctaagcagaattgagcctaatattatctag 320
Query: 121 ttctcttcaacgtctgagcaaaaattgcacggttactctggcagcgtgactgtctgggga 180
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ttctcttcaacgcctgagcaaaaattgcagggttactctggcagcgtgactgtctgggga 380
Query: 181 gtgtggtctctgggagagcaagtcctttgcccaggacgtggtccattgttagttagcaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gtgtggtctctgggagagcaagtcctttgcccaggacgtggtccattgttagttagcagg 440
Query: 241 gcccagttctgcgtgggaggaacttagcagatgttgccttatagtcaggaaacatgctgc 300
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gcccagggctgcgtgggaggaacttagcagatgttgccttgtagtcaggaaacatgctgc 500
Query: 301 ttgtaattttgctttggcgcagtgcagtgttctgcatgcaacccgcgttttctaattgta 360
|||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||
Sbjct: 501 ttgtaattttgctttggcgcagtgcagtgttctgcatgcaacttgtgttttctgattgta 560
Query: 361 aacaaacaaactaactgacaaaacaaagcaacaatggccaaaggtgttcacaggagctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacaaacaaactaactgacaaaacaaagcaacaatggccaaaggtgttcacaggagctgg 620
Query: 421 tctcaggttccactcccttcccaatagcatctttccctggtctctgt 467
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctcaggttccactcccttcccaatagcatctttccctggtctctgt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|