Query= MSMg01no399_j08.b1 MSMg01no399_j08.b1 CHROMAT_FILE:
MSMg01no399_j08.b1 PHD_FILE: MSMg01no399_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:38 2005
(270 letters)
>mm_chr7_86524530_86525199
Length = 670
Score = 474 bits (245), Expect = e-138
Identities = 260/265 (98%)
Strand = Plus / Plus
Query: 6 ggaattccctccttgccggaaagatgctgactacctgccttcctccctccaaggaccttg 65
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattccctccatgctggaaagatgctgactacctgccttcctccctccaaggaccttg 265
Query: 66 cctccccggggttccaacaataaagagttaggagagagagcccggctgacctcatcaaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctccccggggttccaacaataaagagttaggagagagagcccggctgacctcatcaaag 325
Query: 126 gtcacttcttcacagtgccagttttcgatgttgaagagcataaccactcgaccatacttg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtcacttcttcacagtgccagttttcgatgttgaagagcataaccactcgaccatacttg 385
Query: 186 tcccgactggaaaggacaccagggtatccggcctcgacagcgcagcggagagcctccatg 245
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 386 tcccgactggaaaggacaccagggtatccggcctcgatagtgcagcggagagcctccatg 445
Query: 246 gagaggctatcgaagagttcagggt 270
||||| |||||||||||||||||||
Sbjct: 446 gagagactatcgaagagttcagggt 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no399_j08.g1 MSMg01no399_j08.g1 CHROMAT_FILE:
MSMg01no399_j08.g1 PHD_FILE: MSMg01no399_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:38 2005
(140 letters)
>mm_chr7_86717857_86718397
Length = 541
Score = 240 bits (124), Expect = 3e-68
Identities = 136/140 (97%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 1 aattcttc-tcagagccgctggccttgaggaatcggcctggcttcctttggccatggctg 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aattcttcatcagagccgctggccttgaggaatcggcctggcttcctttggccatggctg 281
Query: 60 tttgcaaggagagtaaccctgggagaactgagggcagcagtgtggaccttggcttgcaca 119
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 280 tttgcaaggagagtaaccctgggaggactgagggcaacagtgtggaccttggcttgcaca 221
Query: 120 ctagtgcaaaacaaagccta 139
||||||||||| ||||||||
Sbjct: 220 ctagtgcaaaagaaagccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 541
Length adjustment: 8
Effective length of query: 132
Effective length of database: 533
Effective search space: 70356
Effective search space used: 70356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
