Query= MSMg01no400_h12.b1 MSMg01no400_h12.b1 CHROMAT_FILE:
MSMg01no400_h12.b1 PHD_FILE: MSMg01no400_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:47 2005
(297 letters)
>mm_chr7_151033069_151033765
Length = 697
Score = 542 bits (280), Expect = e-158
Identities = 292/300 (97%), Gaps = 8/300 (2%)
Strand = Plus / Minus
Query: 1 cagccactgtgggacaccaggctctccattctccagatgagcaaactgaggaggcagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cagccactgtgggacaccaggctctccattctccagatgagcaaactgaggaggcagttt 437
Query: 61 gcaggggagagccagatgccagcccccatgcatccaactccacacactcaatgacacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gcaggggagagccagatgccagcccccatgcatccaactccacacactcaatgacacctc 377
Query: 121 tctatgcttcccaaggctgccctcagaagattccaggcagcaggcggtagggcacagcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctatgcttcccaaggctgccctcagaagattccaggcagcaggcggtagggcacagcgg 317
Query: 181 ctgtgtagcgctcccaatcacggccatacttgttggcacagcggtgttcatcacggaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgtgtagcgctcccaatcacggccatacttgttggcacagcggtgttcatcacggaggc 257
Query: 241 agcggtgggtga----ttttgatagtcatatagatgatgtaaaagtaggggaggaggtgg 296
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcggtgggtgagcag----gatagtcatatagatgatgtaaaagtaggggaggaggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_h12.g1 MSMg01no400_h12.g1 CHROMAT_FILE:
MSMg01no400_h12.g1 PHD_FILE: MSMg01no400_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:47 2005
(226 letters)
>mm_chr7_150853135_150853763
Length = 629
Score = 400 bits (207), Expect = e-116
Identities = 222/229 (96%), Gaps = 5/229 (2%)
Strand = Plus / Plus
Query: 1 ggtttggagttcactatggtaggttgcagaagcctgcaggaactagtgatccatccatgc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ggtttggagttcactatggtaggttgcagaagcctgcaggaacaagtgatccatccatgc 260
Query: 61 ataccttaggaagtcgtcaaaccaactgcatggtttggctaggagaggctgagtctcttg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ataccttaggaagtcgtcaaaccaacagcatggtttggctaggagaggctgagtctcttg 320
Query: 121 gatgggggtcatat----tcctctctggtttcaggcaccagatgtacaaagtgaggacaa 176
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgggg-tcatatatattcctctctggtttcaggcaccagatgtacaaagtgaggacaa 379
Query: 177 aactgttccatttctggttagggggaagggttttattgtagataggagg 225
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactgttccatttctggttagggggaagggttttattgtagataggagg 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 629
Length adjustment: 9
Effective length of query: 217
Effective length of database: 620
Effective search space: 134540
Effective search space used: 134540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
