Query= MSMg01no401_k06.b1 MSMg01no401_k06.b1 CHROMAT_FILE:
MSMg01no401_k06.b1 PHD_FILE: MSMg01no401_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:19 2005
(232 letters)
>mm_chr7_91095455_91096086
Length = 632
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Minus
Query: 1 ctcaagggcccttgcctagaactaacctcactttcctttttaggggtgactggatccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctcaagggcccttgcctagaactaacctcactttcctttttaggggtgactggatccgag 373
Query: 61 tggggctctgctacccaagaggcaccaccttttccatcctttcagatgttcacaatcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tggggctctgctacccaagaggcaccaccttttccatcctttcagatgttcacaatcgcc 313
Query: 121 tgctaaagcaaacgtccaagactgggacctttgtgaggactctgcagatgtataaagttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 312 tgctaaagcaaacgtccaagactgggacctttgtgaggactctgcagatggacaaagttg 253
Query: 181 agcagagctatcctggcaggagccactactactgggatgaggattctgggta 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcagagctatcctggcaggagccactactactgggatgaggattctgggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_k06.g1 MSMg01no401_k06.g1 CHROMAT_FILE:
MSMg01no401_k06.g1 PHD_FILE: MSMg01no401_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:19 2005
(291 letters)
>mm_chr7_90972808_90973497
Length = 690
Score = 501 bits (259), Expect = e-146
Identities = 283/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 gggaactcttctgactccttctcagtgtcactggcctgtgtgctgtcgctctcacaatca 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 gggaactcttctgactccttctcagtgtcacttgcctgtgtgctgtcgctctcacaatca 260
Query: 61 ctgtcttttcttcccccccaaaggcatgtgtctttcctcttgcaaatgatcttatgcatc 120
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtcttttttttccccc-aaaggcatgtgtctttcctcttgcaaatgatcttatgcatc 319
Query: 121 gtttcttattgacggtatctgtcttctctactcatcccccctcccccactcccaccccca 180
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 320 gtttcttattgacggtatctgtcttctctactcattgccccacccccactcccaccccca 379
Query: 181 ttgccaataaaagaagccaaggccaatgcatgacattttcatttgtgaaaaatttgatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgccaataaaagaagccaaggccaatgcatgacattttcatttgtgaaaaatttgatat 439
Query: 241 ctggctaaatgaatggaaaataagaatcaccctgcacgtcctttgttgttc 291
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 ctggctaaatgaatggaaaataagaatcaccctgcatgtcctttgttgttc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
