Query= MSMg01no402_a17.b1 MSMg01no402_a17.b1 CHROMAT_FILE:
MSMg01no402_a17.b1 PHD_FILE: MSMg01no402_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:49 2005
(423 letters)
>mm_chr7_148173507_148174329
Length = 823
Score = 758 bits (392), Expect = 0.0
Identities = 418/432 (96%), Gaps = 9/432 (2%)
Strand = Plus / Plus
Query: 1 agttttctctcaaaactacagttattgcctccccctttaggaaagtggcaagagattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttttctctcaaaactacagttattgcctccccctttaggaaagtggcaagagattttc 260
Query: 61 ttaaaaactatttctttttctagaagaaaatgcaaattaggtcttttggcaactctccta 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ttaaaaactatttctttttctagaagaaaatgcaaattagttcttttggcaactctccta 320
Query: 121 agctctgcccaacagccatctggcaacagcttgcttctccaccctccaggtgtgagccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctctgcccaacagccatctggcaacagcttgcttctccaccctccaggtgtgagccaa 380
Query: 181 cccagtttataagaaggactgcaggagccgggcactcaggaggcagaggcaggtggatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccagtttataagaaggactgcaggagccgggcactcaggaggcagaggcaggtggatct 440
Query: 241 ctggatctctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggc 500
Query: 301 tatacagagaaaccctgtctcgaaaaaccaaaaaaaaaaaaaaa---------gaaggac 351
||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 501 tatacagagaaaccctgtctcaaaaaaccaaaaaaaaaaaaaaaaaaaaaaaagaaggac 560
Query: 352 tgcaggactacctcagctctctctctgtctccctgcttcctatccctctcctcctcctcc 411
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 561 tgcaggactacctcagctctctctctgtctccctgcttcctacccctctcttcctcctcc 620
Query: 412 tcctcctcctcc 423
||||||||||||
Sbjct: 621 tcctcctcctcc 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_a17.g1 MSMg01no402_a17.g1 CHROMAT_FILE:
MSMg01no402_a17.g1 PHD_FILE: MSMg01no402_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:49 2005
(536 letters)
>mm_chr7_148338626_148339559
Length = 934
Score = 982 bits (508), Expect = 0.0
Identities = 529/536 (98%), Gaps = 2/536 (0%)
Strand = Plus / Minus
Query: 1 tcctgcctcagcttaccaagcagtggcctctaaaggcatataccaccatttcaggtacaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 734 tcctgcctcagcttaccaagcagtggcctctaaagacatataccaccatttcaggtacaa 675
Query: 61 tttttctttcttaaatcttattggtagcagagaaacttggcataggggtacacattatga 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttttctttcttaaatcttataggtagcagagaaacttggcataggggtacacattatga 615
Query: 121 ctcccgggagttgggggcgagagtcattctagagtacagagcaagtctaaggacaaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctcccgggagttgggggcgagagtcattctagagtacagagcaagtctaaggacaaccta 555
Query: 181 ggctgtaggagaggtggatagatcaggcccacagcctcttgagagaagcaagccagggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggctgtaggagaggtggatagatcaggcccacagcctcttgagagaagcaagccagggag 495
Query: 241 ccttatggaggactagcagtcactctctaccactctaatgttttgcttgccaccctccca 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccagatggaggactagcagtcactctctaccactctaatgttttgcttgccaccctccca 435
Query: 301 agtagcaaggccttgtccttgcgggcccaatgctctgtggttcccttctataactcccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agtagcaaggccttgtccttgcgggcccaatgctctgtggttcccttctataactcccaa 375
Query: 361 gatgtacttgtaggttggaatgttccagaggccctgccacttatatgtcttcagggacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gatgtacttgtaggttggaatgttccagaggccctgccacttatatgtcttcagggacag 315
Query: 421 ccactcgagggtcttcatgccacagtagattgcccagcccgttgcagacgaggacgtcca 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 314 ccactcgagggtcttcatgccacagtaga-tgcccagcccgttgcagacgaggacgtcca 256
Query: 481 tgatccactgggtcaggaaaggagaggagttaaccacggggctctgagatgacggc 536
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 255 tgatccactgggtcaggaaaggagaggaattaaccacggggc-ctgagatgacggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 934
Length adjustment: 10
Effective length of query: 526
Effective length of database: 924
Effective search space: 486024
Effective search space used: 486024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
